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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0086711 through 18771 annotations produced 1 hits



numb-interacting protein (mol):

Annotation Number : CG4482
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086711
Gbrowse : chr2L:14975752-14994040 (-) // 100.0 //
Probeset : 1633290_a_at
Accessions : protein= NP_001036362; /// NP_001036363; /// NP_001036364; /// NP_609733; /// NP_723890;, nucleotide= NM_001042897; /// NM_001042898; /// NM_001042899; /// NM_135889; /// NM_165094;
Pathway : 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // infer
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0086711.
TRiP has 1 RNAi stocks for FBgn0086711 available for purchase.
VDRC has 3 RNAi stocks for FBgn0086711 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain29 ± 24 of 4 0.20Down
Head74 ± 54 of 4 0.40Down
Eye21 ± 34 of 4 0.12Down
Thoracicoabdominal ganglion29 ± 34 of 4 0.20Down
Salivary gland326 ± 124 of 4 1.82Up
Crop194 ± 144 of 4 1.10None
Midgut7 ± 12 of 4 0.00Down
Tubule8 ± 01 of 4 0.00Down
Hindgut120 ± 54 of 4 0.70Down
Heart27 ± 14 of 4 0.15Down
Fat body22 ± 64 of 4 0.13Down
Ovary480 ± 214 of 4 2.70Up
Testis24 ± 04 of 4 0.10Down
Male accessory glands7 ± 20 of 4 0.00Down
Virgin spermatheca17 ± 14 of 4 0.09Down
Mated spermatheca25 ± 34 of 4 0.14Down
Adult carcass84 ± 54 of 4 0.50Down
Larval CNS15 ± 04 of 4 0.09Down
Larval Salivary gland75 ± 44 of 4 0.42Down
Larval midgut8 ± 12 of 4 0.05Down
Larval tubule3 ± 10 of 4 0.00Down
Larval hindgut221 ± 284 of 4 1.23None
Larval fat body10 ± 32 of 4 0.10Down
Larval trachea105 ± 224 of 4 0.59Down
Larval carcass169 ± 144 of 4 0.94None
S2 cells (growing)1 ± 00 of 4 0.01Down
Whole fly179 ± 164 of 4

Looking for FBgn0086711. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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