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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0086768 through 18771 annotations produced 1 hits



"protein D-aspartyl ( L-isoaspartyl O-methyltransferase"):

Annotation Number : CG2152
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : chr3R:1378536-1380033 (-) // 100.0 //
Probeset : 1626213_a_at
Accessions : protein= , nucleotide= NP_536756;
Pathway : 0006464 // protein modification process // inferred from electronic annotation /// 0006464 // protein modification proce
Interpro : 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation
FlyMine data for full length.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain305 84 of 4 1.20Up
Head387 174 of 4 1.50Up
Eye627 244 of 4 2.42Up
Thoracicoabdominal ganglion315 64 of 4 1.20Up
Salivary gland406 94 of 4 1.57Up
Crop457 134 of 4 1.80Up
Midgut199 44 of 4 0.80Down
Tubule425 234 of 4 1.60Up
Hindgut368 54 of 4 1.40Up
Heart368 234 of 4 1.42Up
Fat body232 114 of 4 0.90Down
Ovary168 24 of 4 0.60Down
Testis355 104 of 4 1.40Up
Male accessory glands412 224 of 4 1.60Up
Virgin spermatheca263 94 of 4 1.02None
Mated spermatheca252 84 of 4 0.97None
Adult carcass427 174 of 4 1.60Up
Larval CNS320 74 of 4 1.24Up
Larval Salivary gland247 74 of 4 0.95None
Larval midgut228 104 of 4 0.88Down
Larval tubule459 134 of 4 1.80Up
Larval hindgut348 44 of 4 1.34Up
Larval fat body333 234 of 4 1.30Up
Larval trachea520 394 of 4 2.01Up
Larval carcass392 204 of 4 1.51Up
S2 cells (growing)472 124 of 4 1.82Up
Whole fly259 44 of 4

Looking for FBgn0086768. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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