FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0086768 through 18771 annotations produced 1 hits

"protein D-aspartyl ( L-isoaspartyl O-methyltransferase"):

Annotation Number : CG2152
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : chr3R:1378536-1380033 (-) // 100.0 //
Probeset : 1626213_a_at
Accessions : protein= , nucleotide= NP_536756;
Pathway : 0006464 // protein modification process // inferred from electronic annotation /// 0006464 // protein modification proce
Interpro : 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation
FlyMine data for full length.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	305 ± 8	4 of 4	1.20	Up
Head	387 ± 17	4 of 4	1.50	Up
Eye	627 ± 24	4 of 4	2.42	Up
Thoracicoabdominal ganglion	315 ± 6	4 of 4	1.20	Up
Salivary gland	406 ± 9	4 of 4	1.57	Up
Crop	457 ± 13	4 of 4	1.80	Up
Midgut	199 ± 4	4 of 4	0.80	Down
Tubule	425 ± 23	4 of 4	1.60	Up
Hindgut	368 ± 5	4 of 4	1.40	Up
Heart	368 ± 23	4 of 4	1.42	Up
Fat body	232 ± 11	4 of 4	0.90	Down
Ovary	168 ± 2	4 of 4	0.60	Down
Testis	355 ± 10	4 of 4	1.40	Up
Male accessory glands	412 ± 22	4 of 4	1.60	Up
Virgin spermatheca	263 ± 9	4 of 4	1.02	None
Mated spermatheca	252 ± 8	4 of 4	0.97	None
Adult carcass	427 ± 17	4 of 4	1.60	Up
Larval CNS	320 ± 7	4 of 4	1.24	Up
Larval Salivary gland	247 ± 7	4 of 4	0.95	None
Larval midgut	228 ± 10	4 of 4	0.88	Down
Larval tubule	459 ± 13	4 of 4	1.80	Up
Larval hindgut	348 ± 4	4 of 4	1.34	Up
Larval fat body	333 ± 23	4 of 4	1.30	Up
Larval trachea	520 ± 39	4 of 4	2.01	Up
Larval carcass	392 ± 20	4 of 4	1.51	Up
S2 cells (growing)	472 ± 12	4 of 4	1.82	Up
Whole fly	259 ± 4	4 of 4

Looking for FBgn0086768. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720