FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0086912 through 18771 annotations produced 1 hits

mushroom body miniature (mbm):

Annotation Number : CG11604
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086912
Gbrowse : chr2L:271900-274096 (-) // 100.0 //
Probeset : 1623926_at
Accessions : protein= NP_608511;, nucleotide= NM_134667;
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from p
FlyMine data for FBgn0086912.
BioGrid reports that CG11604 interacts with CG14359 CG32684 .
VDRC has 1 RNAi stocks for FBgn0086912 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	30 ± 2	4 of 4	0.10	Down
Head	40 ± 2	4 of 4	0.20	Down
Eye	28 ± 1	4 of 4	0.13	Down
Thoracicoabdominal ganglion	32 ± 0	4 of 4	0.20	Down
Salivary gland	74 ± 3	4 of 4	0.36	Down
Crop	46 ± 3	4 of 4	0.20	Down
Midgut	58 ± 2	4 of 4	0.30	Down
Tubule	39 ± 7	4 of 4	0.20	Down
Hindgut	34 ± 1	4 of 4	0.20	Down
Heart	32 ± 2	4 of 4	0.15	Down
Fat body	86 ± 12	4 of 4	0.42	Down
Ovary	449 ± 6	4 of 4	2.10	Up
Testis	31 ± 0	4 of 4	0.10	Down
Male accessory glands	153 ± 7	4 of 4	0.70	Down
Virgin spermatheca	64 ± 3	4 of 4	0.31	Down
Mated spermatheca	89 ± 7	4 of 4	0.43	Down
Adult carcass	60 ± 8	4 of 4	0.30	Down
Larval CNS	174 ± 12	4 of 4	0.84	Down
Larval Salivary gland	108 ± 5	4 of 4	0.52	Down
Larval midgut	61 ± 6	4 of 4	0.30	Down
Larval tubule	25 ± 0	4 of 4	0.10	Down
Larval hindgut	62 ± 9	4 of 4	0.30	Down
Larval fat body	20 ± 2	3 of 4	0.10	Down
Larval trachea	139 ± 13	4 of 4	0.66	Down
Larval carcass	112 ± 29	4 of 4	0.54	Down
S2 cells (growing)	189 ± 2	4 of 4	0.91	None
Whole fly	209 ± 10	4 of 4

Looking for FBgn0086912. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720