FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0087007 through 18771 annotations produced 2 hits

CG9587 (bbg):

Annotation Number : CG9587
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0087007
Gbrowse : chr3L:14500705-14506348 (-) // 100.0 //
Probeset : 1630921_at
Accessions : protein= NP_001137949; /// NP_001137950; /// NP_001137951; /// NP_001137952; /// NP_001137953; /// NP_648704; /// NP_648705;, nucleotide= NM_001144477; /// NM_001144478; /// NM_001144479; /// NM_001144480; /// NM_001144481; /// NM_140447; /// NM_140448; /// NM_140448;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from electronic annotation
FlyMine data for FBgn0087007.
VDRC has 5 RNAi stocks for FBgn0087007 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	1.00	None
Head	6 ± 0	0 of 4	1.80	None
Eye	2 ± 0	0 of 4	0.78	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.50	None
Salivary gland	4 ± 1	0 of 4	1.28	None
Crop	0 ± 0	0 of 4	0.30	None
Midgut	16 ± 2	0 of 4	4.80	Up
Tubule	2 ± 0	0 of 4	0.80	None
Hindgut	10 ± 2	2 of 4	2.90	None
Heart	2 ± 0	0 of 4	0.64	None
Fat body	8 ± 2	0 of 4	2.35	None
Ovary	3 ± 0	0 of 4	0.90	None
Testis	5 ± 1	1 of 4	1.60	None
Male accessory glands	4 ± 1	0 of 4	1.20	None
Virgin spermatheca	3 ± 1	0 of 4	1.10	None
Mated spermatheca	3 ± 0	0 of 4	1.07	None
Adult carcass	5 ± 2	0 of 4	1.60	None
Larval CNS	5 ± 3	0 of 4	1.71	None
Larval Salivary gland	4 ± 2	0 of 4	1.41	None
Larval midgut	9 ± 2	0 of 4	2.69	None
Larval tubule	2 ± 0	0 of 4	0.80	None
Larval hindgut	7 ± 1	0 of 4	2.18	None
Larval fat body	3 ± 1	0 of 4	0.90	None
Larval trachea	3 ± 2	0 of 4	0.99	None
Larval carcass	6 ± 1	0 of 4	1.95	None
S2 cells (growing)	3 ± 1	0 of 4	1.09	None
Whole fly	3 ± 1	0 of 4

CG9587 (bbg):

Annotation Number : CG9598
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0087007
Gbrowse : chr3L:14405922-14410432 (-) // 100.0 //
Probeset : 1636947_at
Accessions : protein= NP_001137949; /// NP_001137950; /// NP_001137951; /// NP_001137952; /// NP_001137953; /// NP_648704; /// NP_648705;, nucleotide= NM_001144477; /// NM_001144478; /// NM_001144479; /// NM_001144480; /// NM_001144481; /// NM_140447; /// NM_140448; /// NM_140448;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from electronic annotation
FlyMine data for FBgn0087007.
VDRC has 5 RNAi stocks for FBgn0087007 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	35 ± 2	4 of 4	0.20	Down
Head	105 ± 6	4 of 4	0.70	Down
Eye	113 ± 4	4 of 4	0.72	Down
Thoracicoabdominal ganglion	121 ± 2	4 of 4	0.80	Down
Salivary gland	769 ± 32	4 of 4	4.88	Up
Crop	54 ± 1	4 of 4	0.30	Down
Midgut	883 ± 16	4 of 4	5.60	Up
Tubule	78 ± 10	4 of 4	0.50	Down
Hindgut	274 ± 6	4 of 4	1.70	Up
Heart	163 ± 2	4 of 4	1.03	None
Fat body	378 ± 17	4 of 4	2.40	Up
Ovary	71 ± 1	4 of 4	0.50	Down
Testis	247 ± 13	4 of 4	1.60	Up
Male accessory glands	131 ± 2	4 of 4	0.80	Down
Virgin spermatheca	813 ± 24	4 of 4	5.16	Up
Mated spermatheca	874 ± 77	4 of 4	5.55	Up
Adult carcass	137 ± 12	4 of 4	0.90	None
Larval CNS	192 ± 6	4 of 4	1.22	Up
Larval Salivary gland	1307 ± 63	4 of 4	8.30	Up
Larval midgut	1441 ± 95	4 of 4	9.14	Up
Larval tubule	133 ± 13	4 of 4	0.80	None
Larval hindgut	672 ± 25	4 of 4	4.27	Up
Larval fat body	94 ± 10	4 of 4	0.60	Down
Larval trachea	277 ± 2	4 of 4	1.76	Up
Larval carcass	394 ± 34	4 of 4	2.50	Up
S2 cells (growing)	38 ± 2	4 of 4	0.25	Down
Whole fly	157 ± 3	4 of 4

Looking for FBgn0087007. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720