FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0250754 through 18771 annotations produced 3 hits

CG14896 (CG42232):

Annotation Number : CG14896
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250754
Gbrowse : chr3R:12284001-12288309 (-) // 100.0 //
Probeset : 1636205_at
Accessions : protein= NP_001138060;, nucleotide= NM_001144588;
FlyMine data for FBgn0250754.
TRiP has 2 RNAi stocks for FBgn0250754 available for purchase.
VDRC has 4 RNAi stocks for FBgn0250754 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	80 ± 5	4 of 4	1.20	None
Head	21 ± 1	4 of 4	0.30	Down
Eye	30 ± 6	4 of 4	0.45	Down
Thoracicoabdominal ganglion	64 ± 3	4 of 4	0.90	None
Salivary gland	17 ± 8	0 of 4	0.25	Down
Crop	21 ± 3	4 of 4	0.30	Down
Midgut	13 ± 1	2 of 4	0.20	Down
Tubule	21 ± 1	4 of 4	0.30	Down
Hindgut	31 ± 2	4 of 4	0.50	Down
Heart	17 ± 0	4 of 4	0.25	Down
Fat body	9 ± 4	1 of 4	0.13	Down
Ovary	266 ± 8	4 of 4	3.90	Up
Testis	335 ± 9	4 of 4	4.90	Up
Male accessory glands	35 ± 1	4 of 4	0.50	Down
Virgin spermatheca	16 ± 2	4 of 4	0.24	Down
Mated spermatheca	15 ± 2	4 of 4	0.22	Down
Adult carcass	14 ± 3	1 of 4	0.20	Down
Larval CNS	251 ± 14	4 of 4	3.68	Up
Larval Salivary gland	52 ± 4	4 of 4	0.77	None
Larval midgut	11 ± 2	0 of 4	0.17	Down
Larval tubule	28 ± 1	4 of 4	0.40	Down
Larval hindgut	37 ± 3	4 of 4	0.54	Down
Larval fat body	63 ± 27	4 of 4	0.90	None
Larval trachea	79 ± 3	4 of 4	1.17	None
Larval carcass	32 ± 1	4 of 4	0.48	Down
S2 cells (growing)	217 ± 14	4 of 4	3.19	Up
Whole fly	68 ± 7	4 of 4

CG14896 (CG42232):

Annotation Number : CG14897
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250754
Gbrowse : chr3R:12292740-12295350 (-) // 100.0 //
Probeset : 1635452_a_at
Accessions : protein= NP_001138060;, nucleotide= NM_001144588;
FlyMine data for FBgn0250754.
TRiP has 2 RNAi stocks for FBgn0250754 available for purchase.
VDRC has 4 RNAi stocks for FBgn0250754 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 1	4 of 4	1.30	None
Head	6 ± 1	1 of 4	0.60	Down
Eye	3 ± 1	0 of 4	0.33	Down
Thoracicoabdominal ganglion	11 ± 1	4 of 4	1.00	None
Salivary gland	14 ± 3	1 of 4	1.28	None
Crop	8 ± 1	1 of 4	0.70	None
Midgut	10 ± 1	3 of 4	0.90	None
Tubule	7 ± 0	1 of 4	0.60	Down
Hindgut	11 ± 1	3 of 4	1.00	None
Heart	6 ± 0	2 of 4	0.55	Down
Fat body	8 ± 3	3 of 4	0.78	None
Ovary	16 ± 1	4 of 4	1.50	Up
Testis	9 ± 1	3 of 4	0.80	None
Male accessory glands	9 ± 2	0 of 4	0.80	None
Virgin spermatheca	7 ± 1	3 of 4	0.69	Down
Mated spermatheca	7 ± 1	3 of 4	0.64	Down
Adult carcass	7 ± 1	0 of 4	0.70	None
Larval CNS	10 ± 1	4 of 4	0.92	None
Larval Salivary gland	10 ± 0	0 of 4	0.97	None
Larval midgut	7 ± 0	1 of 4	0.63	Down
Larval tubule	6 ± 1	0 of 4	0.60	None
Larval hindgut	6 ± 1	3 of 4	0.57	None
Larval fat body	11 ± 2	1 of 4	1.10	None
Larval trachea	12 ± 1	4 of 4	1.08	None
Larval carcass	8 ± 1	3 of 4	0.80	None
S2 cells (growing)	13 ± 0	4 of 4	1.21	None
Whole fly	11 ± 0	4 of 4

CG14896 (CG42232):

Annotation Number : CG14897
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250754
Gbrowse : chr3R:12290226-12295342 (-) // 100.0 //
Probeset : 1640737_at
Accessions : protein= NP_001138060;, nucleotide= NM_001144588;
FlyMine data for FBgn0250754.
TRiP has 2 RNAi stocks for FBgn0250754 available for purchase.
VDRC has 4 RNAi stocks for FBgn0250754 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.90	None
Head	0 ± 0	0 of 4	0.30	None
Eye	1 ± 0	0 of 4	0.66	None
Thoracicoabdominal ganglion	4 ± 0	0 of 4	1.40	None
Salivary gland	10 ± 3	0 of 4	3.72	None
Crop	4 ± 2	0 of 4	1.40	None
Midgut	2 ± 0	0 of 4	0.80	None
Tubule	2 ± 0	0 of 4	0.90	None
Hindgut	3 ± 1	0 of 4	1.00	None
Heart	2 ± 0	0 of 4	0.98	None
Fat body	4 ± 2	0 of 4	1.42	None
Ovary	4 ± 1	2 of 4	1.50	None
Testis	4 ± 0	0 of 4	1.40	None
Male accessory glands	1 ± 0	0 of 4	0.60	None
Virgin spermatheca	2 ± 0	0 of 4	0.74	None
Mated spermatheca	0 ± 0	0 of 4	0.22	None
Adult carcass	3 ± 1	0 of 4	1.10	None
Larval CNS	1 ± 0	0 of 4	0.41	None
Larval Salivary gland	7 ± 0	3 of 4	2.48	Up
Larval midgut	1 ± 0	0 of 4	0.62	None
Larval tubule	4 ± 0	1 of 4	1.40	None
Larval hindgut	3 ± 1	2 of 4	1.14	None
Larval fat body	5 ± 1	1 of 4	1.90	None
Larval trachea	2 ± 1	0 of 4	0.71	None
Larval carcass	4 ± 1	0 of 4	1.47	None
S2 cells (growing)	7 ± 0	4 of 4	2.65	Up
Whole fly	2 ± 1	0 of 4

Looking for FBgn0250754. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720