Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0250791 through 18771 annotations produced 1 hits



soluble NSF attachment protein (Snap):

Annotation Number : CG6625
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250791
Gbrowse : chr3L:20306733-20309678 (+) // 100.0 //
Probeset : 1632291_at
Accessions : protein= NP_524180;, nucleotide= NM_079456;
Pathway : engulfment // inferred from mutant phenotype /// 0007268 // synaptic transmission // inferred from mutant phenotype ///
Interpro : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from
FlyMine data for FBgn0250791.
BioGrid reports that CG6625 interacts with CG8738 .
TRiP has 2 RNAi stocks for FBgn0250791 available for purchase.
VDRC has 3 RNAi stocks for FBgn0250791 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2057 814 of 410.80Up
Head954 614 of 4 5.00Up
Eye648 144 of 4 3.39Up
Thoracicoabdominal ganglion2365 824 of 412.40Up
Salivary gland91 64 of 4 0.48Down
Crop206 154 of 4 1.10None
Midgut79 14 of 4 0.40Down
Tubule192 64 of 4 1.00None
Hindgut152 54 of 4 0.80None
Heart131 94 of 4 0.69Down
Fat body85 104 of 4 0.45Down
Ovary36 04 of 4 0.20Down
Testis19 14 of 4 0.10Down
Male accessory glands167 134 of 4 0.90None
Virgin spermatheca196 204 of 4 1.03None
Mated spermatheca171 164 of 4 0.89None
Adult carcass138 54 of 4 0.70Down
Larval CNS644 714 of 4 3.37Up
Larval Salivary gland105 74 of 4 0.55Down
Larval midgut80 64 of 4 0.42Down
Larval tubule222 94 of 4 1.20None
Larval hindgut120 74 of 4 0.63Down
Larval fat body150 164 of 4 0.80None
Larval trachea73 154 of 4 0.38Down
Larval carcass92 44 of 4 0.48Down
S2 cells (growing)121 24 of 4 0.63Down
Whole fly191 134 of 4

Looking for FBgn0250791. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime