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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0250837 through 18771 annotations produced 1 hits



Deoxyuridine triphosphatase (dUTPase):

Annotation Number : CG4584
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250837
Gbrowse : chr2L:11011331-11012138 (+) // 100.0 //
Probeset : 1634637_a_at
Accessions : protein= NP_609479; /// NP_723647;, nucleotide= NM_135635; /// NM_164956;
Interpro : 0004170 // dUTP diphosphatase activity // inferred from direct assay /// 0004170 // dUTP diphosphatase activity // infer
FlyMine data for FBgn0250837.
BioGrid reports that CG4584 interacts with CG8843 CG9326 .
TRiP has 1 RNAi stocks for FBgn0250837 available for purchase.
VDRC has 3 RNAi stocks for FBgn0250837 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain63 ± 14 of 4 0.10Down
Head43 ± 14 of 4 0.10Down
Eye29 ± 14 of 4 0.06Down
Thoracicoabdominal ganglion57 ± 14 of 4 0.10Down
Salivary gland21 ± 31 of 4 0.05Down
Crop44 ± 24 of 4 0.10Down
Midgut72 ± 44 of 4 0.20Down
Tubule54 ± 124 of 4 0.10Down
Hindgut39 ± 14 of 4 0.10Down
Heart43 ± 04 of 4 0.10Down
Fat body62 ± 184 of 4 0.14Down
Ovary1031 ± 184 of 4 2.30Up
Testis46 ± 14 of 4 0.10Down
Male accessory glands138 ± 104 of 4 0.30Down
Virgin spermatheca46 ± 54 of 4 0.10Down
Mated spermatheca51 ± 04 of 4 0.11Down
Adult carcass60 ± 94 of 4 0.10Down
Larval CNS1000 ± 804 of 4 2.23Up
Larval Salivary gland332 ± 254 of 4 0.74Down
Larval midgut59 ± 44 of 4 0.13Down
Larval tubule59 ± 34 of 4 0.10Down
Larval hindgut89 ± 44 of 4 0.20Down
Larval fat body75 ± 94 of 4 0.20Down
Larval trachea445 ± 564 of 4 0.99None
Larval carcass194 ± 74 of 4 0.43Down
S2 cells (growing)1139 ± 354 of 4 2.54Up
Whole fly449 ± 144 of 4

Looking for FBgn0250837. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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