FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0250843 through 18771 annotations produced 1 hits

20s proteasome (Pros35):

Annotation Number : CG4904
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250843
Gbrowse : chr2L:10221352-10222515 (+) // 100.0 //
Probeset : 1631376_at
Accessions : protein= NP_523532;, nucleotide= NM_078808;
Pathway : "0000502 // proteasome complex // non-traceable author statement /// 0000502 // proteasome complex // inferred from elec
Interpro : alpha-subunit complex // inferred from electronic annotation"
FlyMine data for FBgn0250843.
Homophila reports that CG4904 is a close match (2e-26) to human gene P27K;PROS27;PSMA6 (NP_002782), a gene associated with {Myocardial infarcation, susceptibility to} (3).
TRiP has 1 RNAi stocks for FBgn0250843 available for purchase.
VDRC has 2 RNAi stocks for FBgn0250843 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	222 ± 6	4 of 4	0.30	Down
Head	380 ± 20	4 of 4	0.50	Down
Eye	361 ± 12	4 of 4	0.51	Down
Thoracicoabdominal ganglion	258 ± 16	4 of 4	0.40	Down
Salivary gland	480 ± 40	4 of 4	0.68	Down
Crop	525 ± 11	4 of 4	0.70	Down
Midgut	566 ± 31	4 of 4	0.80	Down
Tubule	579 ± 37	4 of 4	0.80	Down
Hindgut	451 ± 21	4 of 4	0.60	Down
Heart	1632 ± 80	4 of 4	2.32	Up
Fat body	1196 ± 113	4 of 4	1.70	Up
Ovary	808 ± 17	4 of 4	1.10	Up
Testis	224 ± 15	4 of 4	0.30	Down
Male accessory glands	660 ± 43	4 of 4	0.90	None
Virgin spermatheca	402 ± 13	4 of 4	0.57	Down
Mated spermatheca	362 ± 15	4 of 4	0.51	Down
Adult carcass	974 ± 65	4 of 4	1.40	Up
Larval CNS	858 ± 83	4 of 4	1.22	Up
Larval Salivary gland	1032 ± 70	4 of 4	1.47	Up
Larval midgut	895 ± 127	4 of 4	1.27	None
Larval tubule	1347 ± 70	4 of 4	1.90	Up
Larval hindgut	887 ± 86	4 of 4	1.26	None
Larval fat body	437 ± 30	4 of 4	0.60	Down
Larval trachea	1105 ± 105	4 of 4	1.57	Up
Larval carcass	1582 ± 196	4 of 4	2.25	Up
S2 cells (growing)	972 ± 42	4 of 4	1.38	Up
Whole fly	704 ± 28	4 of 4

Looking for FBgn0250843. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720