Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0250851 through 18771 annotations produced 1 hits



BEST:GH01256 /// PtdIns(3)P 5-kinase (CG33981 /// fab1):

Annotation Number : CG6355
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028741 /// FBgn0250851
Gbrowse : chr2R:13661465-13669417 (-) // 100.0 //
Probeset : 1628190_at
Accessions : protein= NP_001033954; /// NP_001033955; /// NP_611269; /// NP_995880;, nucleotide= NM_001038865; /// NM_001038866; /// NM_137425; /// NM_206158;
Pathway : 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 001
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0000285 // 1-phosphatidylinositol-3-phosphate 5
FlyMine data for FBgn0028741 /// FBgn0250851.
Homophila reports that CG6355 is a close match (5e-132) to human gene CFD;PIP5K3 (NP_055855), a gene associated with Corneal fleck dystrophy, 121850 (3).


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain11 11 of 4 0.80None
Head10 13 of 4 0.70None
Eye11 02 of 4 0.83None
Thoracicoabdominal ganglion8 11 of 4 0.60None
Salivary gland10 40 of 4 0.76None
Crop11 14 of 4 0.80None
Midgut21 11 of 4 1.50Up
Tubule25 14 of 4 1.80Up
Hindgut16 14 of 4 1.10None
Heart12 13 of 4 0.90None
Fat body16 14 of 4 1.19None
Ovary20 13 of 4 1.50None
Testis24 24 of 4 1.70Up
Male accessory glands31 33 of 4 2.30Up
Virgin spermatheca16 14 of 4 1.19None
Mated spermatheca15 23 of 4 1.11None
Adult carcass17 21 of 4 1.30None
Larval CNS25 54 of 4 1.79Up
Larval Salivary gland11 12 of 4 0.80None
Larval midgut27 23 of 4 1.93Up
Larval tubule13 22 of 4 0.90None
Larval hindgut26 14 of 4 1.88Up
Larval fat body27 53 of 4 1.90None
Larval trachea11 34 of 4 0.83None
Larval carcass25 24 of 4 1.85Up
S2 cells (growing)60 24 of 4 4.33Up
Whole fly14 24 of 4

Looking for FBgn0250851. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime