FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0250910 through 18771 annotations produced 4 hits

CG18554 (Octbeta3R):

Annotation Number : CG31350
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250910
Gbrowse : chr3R:8338534-8341334 (-) // 100.0 //
Probeset : 1630381_at
Accessions : protein= NP_001034043; /// NP_001034046; /// NP_001034048; /// NP_650210;, nucleotide= NM_001038954; /// NM_001038957; /// NM_001038959; /// NM_001038959; /// NM_141953; /// NM_141953;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0250910.
TRiP has 1 RNAi stocks for FBgn0250910 available for purchase.
VDRC has 8 RNAi stocks for FBgn0250910 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	26 ± 4	4 of 4	12.20	Up
Head	9 ± 0	0 of 4	4.10	Up
Eye	2 ± 0	0 of 4	1.08	None
Thoracicoabdominal ganglion	24 ± 2	4 of 4	11.10	Up
Salivary gland	1 ± 0	0 of 4	0.76	None
Crop	2 ± 1	0 of 4	0.90	None
Midgut	1 ± 0	0 of 4	0.60	None
Tubule	4 ± 0	0 of 4	2.00	Up
Hindgut	2 ± 0	0 of 4	1.10	None
Heart	1 ± 0	0 of 4	0.51	None
Fat body	1 ± 0	0 of 4	0.55	None
Ovary	1 ± 0	0 of 4	0.60	None
Testis	1 ± 0	0 of 4	0.70	None
Male accessory glands	6 ± 2	0 of 4	3.10	None
Virgin spermatheca	2 ± 0	0 of 4	0.89	None
Mated spermatheca	1 ± 0	0 of 4	0.61	None
Adult carcass	3 ± 1	0 of 4	1.50	None
Larval CNS	10 ± 1	1 of 4	4.58	Up
Larval Salivary gland	1 ± 0	0 of 4	0.63	None
Larval midgut	3 ± 1	0 of 4	1.70	None
Larval tubule	7 ± 1	1 of 4	3.50	Up
Larval hindgut	2 ± 0	0 of 4	1.01	None
Larval fat body	4 ± 2	0 of 4	2.10	None
Larval trachea	0 ± 0	0 of 4	0.44	None
Larval carcass	0 ± 0	0 of 4	0.32	None
S2 cells (growing)	1 ± 0	0 of 4	0.56	None
Whole fly	2 ± 0	0 of 4

CG18554 (Octbeta3R):

Annotation Number : CG31348
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250910
Gbrowse : chr3R:8347515-8348381 (-) // 100.0 //
Probeset : 1626861_at
Accessions : protein= NP_001034043; /// NP_001034046; /// NP_001034048; /// NP_650210;, nucleotide= NM_001038954; /// NM_001038957; /// NM_001038959; /// NM_001038959; /// NM_141953; /// NM_141953;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0250910.
TRiP has 1 RNAi stocks for FBgn0250910 available for purchase.
VDRC has 8 RNAi stocks for FBgn0250910 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	2.40	Up
Head	0 ± 0	0 of 4	0.60	None
Eye	2 ± 1	0 of 4	2.53	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.70	None
Salivary gland	2 ± 0	0 of 4	2.56	None
Crop	1 ± 0	0 of 4	1.50	None
Midgut	0 ± 0	0 of 4	0.70	None
Tubule	1 ± 0	0 of 4	1.00	None
Hindgut	1 ± 0	0 of 4	0.90	None
Heart	3 ± 0	0 of 4	3.16	None
Fat body	1 ± 1	0 of 4	1.56	None
Ovary	1 ± 0	0 of 4	1.70	None
Testis	1 ± 0	0 of 4	1.10	None
Male accessory glands	2 ± 1	0 of 4	2.20	None
Virgin spermatheca	3 ± 0	0 of 4	2.77	None
Mated spermatheca	2 ± 0	0 of 4	2.00	None
Adult carcass	1 ± 0	0 of 4	1.20	None
Larval CNS	1 ± 1	0 of 4	1.40	None
Larval Salivary gland	2 ± 1	0 of 4	2.12	None
Larval midgut	4 ± 2	0 of 4	4.00	None
Larval tubule	1 ± 0	0 of 4	0.90	None
Larval hindgut	2 ± 1	0 of 4	2.49	None
Larval fat body	2 ± 1	0 of 4	2.20	None
Larval trachea	2 ± 0	0 of 4	2.37	None
Larval carcass	1 ± 0	0 of 4	0.98	None
S2 cells (growing)	1 ± 0	0 of 4	1.37	None
Whole fly	1 ± 0	0 of 4

CG18554 (Octbeta3R):

Annotation Number : CG31351
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250910
Gbrowse : chr3R:8344595-8346757 (-) // 100.0 //
Probeset : 1626329_at
Accessions : protein= NP_001034043; /// NP_001034046; /// NP_001034048; /// NP_650210;, nucleotide= NM_001038954; /// NM_001038957; /// NM_001038959; /// NM_001038959; /// NM_141953; /// NM_141953;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0250910.
TRiP has 1 RNAi stocks for FBgn0250910 available for purchase.
VDRC has 8 RNAi stocks for FBgn0250910 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	5.50	None
Head	3 ± 1	0 of 4	4.40	None
Eye	0 ± 0	0 of 4	0.87	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	2.10	None
Salivary gland	10 ± 3	0 of 4	12.97	None
Crop	6 ± 0	0 of 4	8.60	Up
Midgut	4 ± 2	0 of 4	6.00	None
Tubule	3 ± 1	0 of 4	4.50	Up
Hindgut	1 ± 0	0 of 4	2.00	None
Heart	5 ± 0	0 of 4	6.65	Up
Fat body	6 ± 3	0 of 4	7.90	Up
Ovary	3 ± 1	0 of 4	3.80	None
Testis	1 ± 0	0 of 4	2.00	None
Male accessory glands	4 ± 3	0 of 4	5.40	None
Virgin spermatheca	4 ± 1	0 of 4	5.29	None
Mated spermatheca	5 ± 1	0 of 4	6.45	None
Adult carcass	4 ± 1	0 of 4	5.10	None
Larval CNS	2 ± 1	0 of 4	3.52	None
Larval Salivary gland	1 ± 0	0 of 4	2.39	None
Larval midgut	5 ± 2	1 of 4	7.16	None
Larval tubule	4 ± 0	0 of 4	6.10	Up
Larval hindgut	5 ± 1	0 of 4	6.39	None
Larval fat body	4 ± 1	0 of 4	5.80	None
Larval trachea	1 ± 0	0 of 4	1.35	None
Larval carcass	1 ± 0	0 of 4	1.74	Up
S2 cells (growing)	3 ± 1	0 of 4	4.74	None
Whole fly	0 ± 0	0 of 4

CG18554 (Octbeta3R):

Annotation Number : CG18554
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0250910
Gbrowse : chr3R:8342163-8344041 (-) // 100.0 //
Probeset : 1636627_at
Accessions : protein= NP_001034043; /// NP_001034046; /// NP_001034048; /// NP_650210;, nucleotide= NM_001038954; /// NM_001038957; /// NM_001038959; /// NM_001038959; /// NM_141953; /// NM_141953;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0250910.
TRiP has 1 RNAi stocks for FBgn0250910 available for purchase.
VDRC has 8 RNAi stocks for FBgn0250910 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	12 ± 1	4 of 4	15.90	Up
Head	0 ± 0	0 of 4	1.10	None
Eye	3 ± 1	0 of 4	4.43	None
Thoracicoabdominal ganglion	5 ± 2	0 of 4	7.30	None
Salivary gland	6 ± 2	0 of 4	8.47	None
Crop	1 ± 0	0 of 4	2.30	None
Midgut	1 ± 0	0 of 4	1.70	None
Tubule	3 ± 0	0 of 4	4.30	Up
Hindgut	0 ± 0	0 of 4	0.70	None
Heart	2 ± 0	0 of 4	3.73	None
Fat body	0 ± 0	0 of 4	0.83	None
Ovary	2 ± 0	0 of 4	3.60	None
Testis	1 ± 0	0 of 4	1.70	None
Male accessory glands	4 ± 1	0 of 4	5.30	None
Virgin spermatheca	0 ± 0	0 of 4	0.67	Down
Mated spermatheca	0 ± 0	0 of 4	1.23	Up
Adult carcass	1 ± 0	0 of 4	1.70	Up
Larval CNS	2 ± 1	0 of 4	3.33	None
Larval Salivary gland	2 ± 0	0 of 4	3.80	Up
Larval midgut	1 ± 0	0 of 4	1.60	None
Larval tubule	3 ± 1	0 of 4	4.00	None
Larval hindgut	0 ± 0	0 of 4	0.77	None
Larval fat body	1 ± 0	0 of 4	1.50	None
Larval trachea	3 ± 4	0 of 4	4.83	None
Larval carcass	0 ± 0	0 of 4	0.97	None
S2 cells (growing)	0 ± 0	0 of 4	1.30	None
Whole fly	0 ± 0	0 of 4

Looking for FBgn0250910. 4 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720