FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0259099 through 18771 annotations produced 2 hits

CG13466 (CG42247):

Annotation Number : CG13466
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259099
Gbrowse : chr3L:14914800-14936006 (+) // 100.0 //
Probeset : 1634073_at
Accessions : protein= NP_648728; /// NP_648729;, nucleotide= NM_140471; /// NM_140472; /// NM_140472;
Pathway : 0005874 // microtubule // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from seq
FlyMine data for FBgn0259099.
TRiP has 1 RNAi stocks for FBgn0259099 available for purchase.
VDRC has 5 RNAi stocks for FBgn0259099 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	30 ± 2	4 of 4	2.50	Up
Head	34 ± 2	4 of 4	2.90	Up
Eye	67 ± 5	4 of 4	5.68	Up
Thoracicoabdominal ganglion	45 ± 0	4 of 4	3.80	Up
Salivary gland	22 ± 0	0 of 4	1.85	Up
Crop	8 ± 4	0 of 4	0.70	None
Midgut	8 ± 0	1 of 4	0.70	Down
Tubule	4 ± 0	0 of 4	0.40	Down
Hindgut	7 ± 1	0 of 4	0.60	Down
Heart	17 ± 2	4 of 4	1.43	None
Fat body	13 ± 5	1 of 4	1.10	None
Ovary	5 ± 0	0 of 4	0.50	Down
Testis	9 ± 1	3 of 4	0.80	None
Male accessory glands	6 ± 1	0 of 4	0.60	Down
Virgin spermatheca	11 ± 1	0 of 4	0.99	None
Mated spermatheca	11 ± 1	0 of 4	0.94	None
Adult carcass	41 ± 2	4 of 4	3.50	Up
Larval CNS	11 ± 1	4 of 4	0.98	None
Larval Salivary gland	9 ± 1	0 of 4	0.79	None
Larval midgut	8 ± 1	0 of 4	0.71	None
Larval tubule	8 ± 0	0 of 4	0.70	Down
Larval hindgut	6 ± 1	0 of 4	0.54	Down
Larval fat body	8 ± 1	0 of 4	0.70	None
Larval trachea	7 ± 2	2 of 4	0.59	Down
Larval carcass	12 ± 0	0 of 4	1.09	None
S2 cells (growing)	6 ± 0	0 of 4	0.53	Down
Whole fly	11 ± 0	1 of 4

CG13466 (CG42247):

Annotation Number : CG13467
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259099
Gbrowse : chr3L:14897213-14898237 (+) // 100.0 //
Probeset : 1632746_at
Accessions : protein= NP_648728; /// NP_648729;, nucleotide= NM_140471; /// NM_140472; /// NM_140472;
Pathway : 0005874 // microtubule // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from seq
FlyMine data for FBgn0259099.
TRiP has 1 RNAi stocks for FBgn0259099 available for purchase.
VDRC has 5 RNAi stocks for FBgn0259099 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	4.10	None
Head	2 ± 1	0 of 4	3.40	None
Eye	3 ± 2	0 of 4	5.57	None
Thoracicoabdominal ganglion	2 ± 1	0 of 4	3.00	None
Salivary gland	6 ± 2	0 of 4	8.82	None
Crop	3 ± 0	0 of 4	5.10	Up
Midgut	4 ± 1	0 of 4	6.00	None
Tubule	3 ± 1	0 of 4	4.70	Up
Hindgut	3 ± 1	0 of 4	4.60	None
Heart	2 ± 0	0 of 4	4.18	Up
Fat body	6 ± 5	0 of 4	9.04	None
Ovary	1 ± 0	0 of 4	2.30	None
Testis	2 ± 0	0 of 4	2.80	None
Male accessory glands	3 ± 0	0 of 4	5.30	Up
Virgin spermatheca	1 ± 0	0 of 4	2.54	None
Mated spermatheca	6 ± 1	0 of 4	9.11	Up
Adult carcass	7 ± 3	0 of 4	10.60	None
Larval CNS	3 ± 2	0 of 4	4.57	None
Larval Salivary gland	2 ± 0	0 of 4	3.36	None
Larval midgut	1 ± 1	0 of 4	2.68	None
Larval tubule	1 ± 0	0 of 4	2.60	Up
Larval hindgut	2 ± 0	0 of 4	3.43	None
Larval fat body	6 ± 2	0 of 4	8.90	None
Larval trachea	2 ± 2	0 of 4	3.00	None
Larval carcass	1 ± 0	0 of 4	2.29	None
S2 cells (growing)	2 ± 0	0 of 4	2.93	None
Whole fly	0 ± 0	0 of 4

Looking for FBgn0259099. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720