FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0259139 through 18771 annotations produced 1 hits

glorund (glo):

Annotation Number : CG6946
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259139
Gbrowse : chr3R:7640921-7645142 (-) // 100.0 //
Probeset : 1641170_a_at
Accessions : protein= NP_650120; /// NP_731639; /// NP_731640;, nucleotide= NM_141863; /// NM_169434; /// NM_169435;
Pathway : oocyte
Interpro : germ-line encoded // inferred from mutant phenotype /// 0045451 // pole plasm oskar mRNA localization // inferred from
FlyMine data for FBgn0259139.
BioGrid reports that CG6946 interacts with CG7399 CG8597 CG8942 CG9173 CG9373 .
TRiP has 2 RNAi stocks for FBgn0259139 available for purchase.
VDRC has 2 RNAi stocks for FBgn0259139 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	836 ± 33	4 of 4	2.60	Up
Head	350 ± 9	4 of 4	1.10	None
Eye	276 ± 9	4 of 4	0.87	None
Thoracicoabdominal ganglion	529 ± 15	4 of 4	1.70	Up
Salivary gland	392 ± 27	4 of 4	1.24	None
Crop	286 ± 4	4 of 4	0.90	None
Midgut	223 ± 10	4 of 4	0.70	Down
Tubule	573 ± 5	4 of 4	1.80	Up
Hindgut	319 ± 6	4 of 4	1.00	None
Heart	155 ± 8	4 of 4	0.49	Down
Fat body	154 ± 26	4 of 4	0.49	Down
Ovary	703 ± 22	4 of 4	2.20	Up
Testis	164 ± 7	4 of 4	0.50	Down
Male accessory glands	338 ± 14	4 of 4	1.10	None
Virgin spermatheca	215 ± 8	4 of 4	0.68	Down
Mated spermatheca	205 ± 9	4 of 4	0.65	Down
Adult carcass	202 ± 7	4 of 4	0.60	Down
Larval CNS	1062 ± 23	4 of 4	3.36	Up
Larval Salivary gland	460 ± 11	4 of 4	1.46	Up
Larval midgut	131 ± 7	4 of 4	0.41	Down
Larval tubule	336 ± 22	4 of 4	1.10	None
Larval hindgut	312 ± 10	4 of 4	0.99	None
Larval fat body	289 ± 11	4 of 4	0.90	None
Larval trachea	435 ± 51	4 of 4	1.38	Up
Larval carcass	340 ± 26	4 of 4	1.07	None
S2 cells (growing)	560 ± 13	4 of 4	1.77	Up
Whole fly	316 ± 14	4 of 4

Looking for FBgn0259139. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720