FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0259173 through 18771 annotations produced 2 hits

cornetto (corn):

Annotation Number : CG32386
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259173
Gbrowse : chr3L:7137623-7150173 (-) // 100.0 //
Probeset : 1635475_at
Accessions : protein= NP_523954; /// NP_729220;, nucleotide= NM_079230; /// NM_168193; /// NM_168193;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0045177
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from dir
FlyMine data for FBgn0259173.
BioGrid reports that CG32386 interacts with CG6509 CG33105 .
VDRC has 4 RNAi stocks for FBgn0259173 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	125 ± 1	4 of 4	4.10	Up
Head	75 ± 5	4 of 4	2.50	Up
Eye	192 ± 7	4 of 4	6.37	Up
Thoracicoabdominal ganglion	172 ± 2	4 of 4	5.70	Up
Salivary gland	11 ± 2	0 of 4	0.38	Down
Crop	7 ± 0	0 of 4	0.20	Down
Midgut	153 ± 5	4 of 4	5.10	Up
Tubule	15 ± 3	3 of 4	0.50	Down
Hindgut	198 ± 6	4 of 4	6.60	Up
Heart	49 ± 2	4 of 4	1.63	Up
Fat body	11 ± 1	1 of 4	0.38	Down
Ovary	5 ± 1	1 of 4	0.20	Down
Testis	12 ± 1	4 of 4	0.40	Down
Male accessory glands	13 ± 2	0 of 4	0.50	Down
Virgin spermatheca	17 ± 1	4 of 4	0.58	Down
Mated spermatheca	19 ± 1	4 of 4	0.64	Down
Adult carcass	21 ± 0	3 of 4	0.70	Down
Larval CNS	318 ± 12	4 of 4	10.54	Up
Larval Salivary gland	10 ± 2	2 of 4	0.34	Down
Larval midgut	328 ± 21	4 of 4	10.88	Up
Larval tubule	99 ± 10	4 of 4	3.30	Up
Larval hindgut	306 ± 13	4 of 4	10.17	Up
Larval fat body	25 ± 3	4 of 4	0.80	None
Larval trachea	37 ± 5	4 of 4	1.24	None
Larval carcass	326 ± 16	4 of 4	10.82	Up
S2 cells (growing)	14 ± 1	4 of 4	0.48	Down
Whole fly	30 ± 2	4 of 4

cornetto (corn):

Annotation Number : CG32390
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259173
Gbrowse : chr3L:7136875-7137462 (-) // 100.0 //
Probeset : 1632199_at
Accessions : protein= NP_523954; /// NP_729220;, nucleotide= NM_079230; /// NM_168193; /// NM_168193;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0045177
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from dir
FlyMine data for FBgn0259173.
VDRC has 4 RNAi stocks for FBgn0259173 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	139 ± 7	4 of 4	19.40	Up
Head	28 ± 3	4 of 4	4.00	Up
Eye	29 ± 4	4 of 4	4.06	Up
Thoracicoabdominal ganglion	104 ± 10	4 of 4	14.50	Up
Salivary gland	15 ± 3	1 of 4	2.08	None
Crop	3 ± 0	0 of 4	0.50	None
Midgut	17 ± 1	2 of 4	2.40	Up
Tubule	5 ± 0	0 of 4	0.70	None
Hindgut	16 ± 2	3 of 4	2.30	Up
Heart	1 ± 0	0 of 4	0.25	Down
Fat body	9 ± 2	0 of 4	1.27	None
Ovary	1 ± 1	0 of 4	0.30	Down
Testis	5 ± 0	1 of 4	0.70	None
Male accessory glands	5 ± 2	0 of 4	0.80	None
Virgin spermatheca	7 ± 1	0 of 4	1.10	None
Mated spermatheca	7 ± 1	1 of 4	1.09	None
Adult carcass	12 ± 4	2 of 4	1.70	None
Larval CNS	64 ± 3	4 of 4	8.99	Up
Larval Salivary gland	3 ± 0	0 of 4	0.53	None
Larval midgut	17 ± 1	4 of 4	2.41	Up
Larval tubule	13 ± 1	2 of 4	1.90	Up
Larval hindgut	11 ± 2	2 of 4	1.62	None
Larval fat body	7 ± 2	1 of 4	1.00	None
Larval trachea	2 ± 1	0 of 4	0.29	Down
Larval carcass	9 ± 2	0 of 4	1.29	None
S2 cells (growing)	2 ± 1	1 of 4	0.33	None
Whole fly	7 ± 1	0 of 4

Looking for FBgn0259173. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720