FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0259210 through 18771 annotations produced 3 hits

prominin (prom):

Annotation Number : CG30166
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259210
Gbrowse : chr2R:20313145-20313496 (-) // 100.0 //
Probeset : 1637433_at
Accessions : protein= NP_001137753; /// NP_001137754; /// NP_726444;, nucleotide= NM_001144281; /// NM_001144282; /// NM_166671;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
FlyMine data for FBgn0259210.
VDRC has 5 RNAi stocks for FBgn0259210 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.70	None
Head	15 ± 4	2 of 4	3.30	None
Eye	9 ± 0	3 of 4	2.06	Up
Thoracicoabdominal ganglion	7 ± 1	0 of 4	1.50	None
Salivary gland	13 ± 3	0 of 4	2.79	None
Crop	4 ± 1	0 of 4	0.90	None
Midgut	8 ± 2	0 of 4	1.80	None
Tubule	3 ± 0	0 of 4	0.60	Down
Hindgut	6 ± 1	0 of 4	1.30	None
Heart	1 ± 0	0 of 4	0.42	None
Fat body	4 ± 3	0 of 4	1.02	None
Ovary	2 ± 0	0 of 4	0.50	None
Testis	2 ± 1	0 of 4	0.50	None
Male accessory glands	5 ± 1	0 of 4	1.10	None
Virgin spermatheca	3 ± 2	0 of 4	0.66	None
Mated spermatheca	1 ± 0	0 of 4	0.38	None
Adult carcass	6 ± 1	0 of 4	1.30	None
Larval CNS	4 ± 1	0 of 4	0.87	None
Larval Salivary gland	3 ± 0	0 of 4	0.83	None
Larval midgut	2 ± 0	0 of 4	0.42	None
Larval tubule	1 ± 0	0 of 4	0.30	None
Larval hindgut	1 ± 0	0 of 4	0.20	Down
Larval fat body	6 ± 1	0 of 4	1.40	None
Larval trachea	2 ± 2	0 of 4	0.51	None
Larval carcass	3 ± 1	0 of 4	0.75	None
S2 cells (growing)	1 ± 0	0 of 4	0.28	None
Whole fly	4 ± 1	0 of 4

prominin (prom):

Annotation Number : CG30164
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259210
Gbrowse : chr2R:20306483-20311346 (-) // 100.0 //
Probeset : 1626504_at
Accessions : protein= NP_001137753; /// NP_001137754; /// NP_726444;, nucleotide= NM_001144281; /// NM_001144282; /// NM_166671;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
FlyMine data for FBgn0259210.
VDRC has 5 RNAi stocks for FBgn0259210 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.80	None
Head	22 ± 0	2 of 4	18.60	Up
Eye	26 ± 5	2 of 4	22.06	Up
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.40	None
Salivary gland	1 ± 0	0 of 4	1.17	None
Crop	0 ± 0	0 of 4	0.80	None
Midgut	0 ± 0	0 of 4	0.70	None
Tubule	0 ± 0	0 of 4	0.70	Down
Hindgut	1 ± 0	0 of 4	1.10	None
Heart	0 ± 0	0 of 4	0.48	None
Fat body	0 ± 0	0 of 4	0.63	None
Ovary	0 ± 0	0 of 4	0.40	None
Testis	0 ± 0	0 of 4	0.30	None
Male accessory glands	1 ± 0	0 of 4	1.00	None
Virgin spermatheca	0 ± 0	0 of 4	0.54	None
Mated spermatheca	0 ± 0	0 of 4	0.44	None
Adult carcass	1 ± 0	0 of 4	1.10	None
Larval CNS	0 ± 0	0 of 4	0.35	None
Larval Salivary gland	1 ± 0	0 of 4	0.81	None
Larval midgut	1 ± 0	0 of 4	0.79	None
Larval tubule	1 ± 0	0 of 4	1.50	None
Larval hindgut	0 ± 0	0 of 4	0.40	None
Larval fat body	0 ± 0	0 of 4	0.70	None
Larval trachea	1 ± 1	0 of 4	1.38	None
Larval carcass	0 ± 0	0 of 4	0.69	None
S2 cells (growing)	0 ± 0	0 of 4	0.42	None
Whole fly	1 ± 0	0 of 4

prominin (prom):

Annotation Number : CG30165
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259210
Gbrowse : chr2R:20303093-20306195 (-) // 100.0 //
Probeset : 1641220_at
Accessions : protein= NP_001137753; /// NP_001137754; /// NP_726444;, nucleotide= NM_001144281; /// NM_001144282; /// NM_166671;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
FlyMine data for FBgn0259210.
VDRC has 5 RNAi stocks for FBgn0259210 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 0	1 of 4	1.60	None
Head	22 ± 1	3 of 4	6.30	Up
Eye	58 ± 11	4 of 4	16.00	Up
Thoracicoabdominal ganglion	3 ± 1	0 of 4	1.00	None
Salivary gland	3 ± 1	0 of 4	0.97	None
Crop	5 ± 1	0 of 4	1.60	None
Midgut	1 ± 0	0 of 4	0.30	Down
Tubule	1 ± 0	0 of 4	0.50	Down
Hindgut	1 ± 0	0 of 4	0.50	None
Heart	1 ± 0	0 of 4	0.53	None
Fat body	2 ± 2	0 of 4	0.54	None
Ovary	1 ± 0	0 of 4	0.50	None
Testis	1 ± 0	0 of 4	0.30	Down
Male accessory glands	3 ± 1	0 of 4	1.00	None
Virgin spermatheca	0 ± 0	0 of 4	0.16	Down
Mated spermatheca	2 ± 1	0 of 4	0.63	None
Adult carcass	2 ± 0	0 of 4	0.80	None
Larval CNS	3 ± 1	0 of 4	0.93	None
Larval Salivary gland	1 ± 0	0 of 4	0.27	Down
Larval midgut	2 ± 0	0 of 4	0.81	None
Larval tubule	1 ± 0	0 of 4	0.50	None
Larval hindgut	2 ± 0	0 of 4	0.54	None
Larval fat body	0 ± 0	0 of 4	0.20	Down
Larval trachea	2 ± 2	0 of 4	0.66	None
Larval carcass	4 ± 1	0 of 4	1.32	None
S2 cells (growing)	2 ± 1	0 of 4	0.73	None
Whole fly	3 ± 0	0 of 4

Looking for FBgn0259210. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720