FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0259212 through 18771 annotations produced 2 hits

canoe (cno):

Annotation Number : CG31537
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259212
Gbrowse : chr3R:1004445-1006410 (-) // 100.0 //
Probeset : 1633156_at
Accessions : protein= NP_524232; /// NP_730891; /// NP_730892;, nucleotide= NM_079508; /// NM_169025; /// NM_169026; /// NM_169026;
Pathway : elongation of leading edge cells // non-traceable author statement /// 0016318 // ommatidial rotation // inferred from
Interpro : 0005912 // adherens junction // inferred from direct assay /// 0005912 // adherens junction // non-traceable author stat
FlyMine data for FBgn0259212.
TRiP has 2 RNAi stocks for FBgn0259212 available for purchase.
VDRC has 2 RNAi stocks for FBgn0259212 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	3.70	Up
Head	2 ± 1	0 of 4	2.30	None
Eye	0 ± 0	0 of 4	1.06	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	5.60	Up
Salivary gland	7 ± 2	0 of 4	8.71	None
Crop	4 ± 1	0 of 4	5.70	None
Midgut	2 ± 0	0 of 4	2.40	None
Tubule	5 ± 0	0 of 4	6.80	Up
Hindgut	4 ± 0	1 of 4	5.60	Up
Heart	2 ± 0	0 of 4	2.56	None
Fat body	1 ± 1	0 of 4	1.97	None
Ovary	2 ± 0	0 of 4	3.00	None
Testis	1 ± 0	0 of 4	1.70	None
Male accessory glands	5 ± 1	0 of 4	5.90	None
Virgin spermatheca	2 ± 1	0 of 4	2.97	None
Mated spermatheca	1 ± 0	0 of 4	1.32	None
Adult carcass	2 ± 0	0 of 4	2.40	None
Larval CNS	1 ± 1	0 of 4	1.85	None
Larval Salivary gland	7 ± 2	1 of 4	8.53	None
Larval midgut	1 ± 0	0 of 4	1.53	None
Larval tubule	6 ± 2	1 of 4	7.10	None
Larval hindgut	1 ± 0	0 of 4	2.03	None
Larval fat body	3 ± 0	0 of 4	4.50	Up
Larval trachea	1 ± 0	0 of 4	1.29	None
Larval carcass	3 ± 0	0 of 4	3.97	None
S2 cells (growing)	3 ± 1	0 of 4	3.97	None
Whole fly	0 ± 0	0 of 4

canoe (cno):

Annotation Number : CG2534
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259212
Gbrowse : chr3R:999319-1043147 (-) // 100.0 //
Probeset : 1632618_a_at
Accessions : protein= NP_524232; /// NP_730891; /// NP_730892;, nucleotide= NM_079508; /// NM_169025; /// NM_169026; /// NM_169026;
Pathway : elongation of leading edge cells // non-traceable author statement /// 0016318 // ommatidial rotation // inferred from
Interpro : 0005912 // adherens junction // inferred from direct assay /// 0005912 // adherens junction // non-traceable author stat
FlyMine data for FBgn0259212.
BioGrid reports that CG2534 interacts with CG5680 CG5460 CG3936 CG1167 CG9375 .
TRiP has 2 RNAi stocks for FBgn0259212 available for purchase.
VDRC has 2 RNAi stocks for FBgn0259212 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	50 ± 2	4 of 4	0.60	Down
Head	41 ± 4	4 of 4	0.50	Down
Eye	43 ± 3	4 of 4	0.52	Down
Thoracicoabdominal ganglion	27 ± 3	4 of 4	0.30	Down
Salivary gland	94 ± 11	4 of 4	1.16	None
Crop	49 ± 6	4 of 4	0.60	Down
Midgut	21 ± 1	4 of 4	0.30	Down
Tubule	26 ± 1	4 of 4	0.30	Down
Hindgut	24 ± 1	4 of 4	0.30	Down
Heart	150 ± 12	4 of 4	1.84	Up
Fat body	15 ± 5	3 of 4	0.19	Down
Ovary	339 ± 8	4 of 4	4.10	Up
Testis	36 ± 2	4 of 4	0.40	Down
Male accessory glands	38 ± 3	4 of 4	0.50	Down
Virgin spermatheca	12 ± 2	2 of 4	0.15	Down
Mated spermatheca	15 ± 1	3 of 4	0.19	Down
Adult carcass	38 ± 3	4 of 4	0.50	Down
Larval CNS	41 ± 2	4 of 4	0.51	Down
Larval Salivary gland	46 ± 4	4 of 4	0.57	Down
Larval midgut	23 ± 6	3 of 4	0.29	Down
Larval tubule	41 ± 5	4 of 4	0.50	Down
Larval hindgut	27 ± 3	4 of 4	0.33	Down
Larval fat body	33 ± 3	4 of 4	0.40	Down
Larval trachea	48 ± 5	4 of 4	0.59	Down
Larval carcass	29 ± 1	4 of 4	0.36	Down
S2 cells (growing)	67 ± 2	4 of 4	0.82	Down
Whole fly	81 ± 4	4 of 4

Looking for FBgn0259212. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720