FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0259222 through 18771 annotations produced 2 hits

CG15690 (CG42322):

Annotation Number : CG31203
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259222
Gbrowse : chr3R:16565835-16579363 (+) // 98.76 //
Probeset : 1630733_s_at
Accessions : protein= NP_001138089; /// NP_001138090; /// NP_001138091; /// NP_732547; /// NP_732548; /// NP_732549; /// NP_732550; /// NP_732551;, nucleotide= NM_001144617; /// NM_001144618; /// NM_001144619; /// NM_169918; /// NM_169919; /// NM_169920; /// NM_169921; /// NM_169922;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0259222.
VDRC has 3 RNAi stocks for FBgn0259222 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	479 ± 19	4 of 4	33.90	Up
Head	87 ± 4	4 of 4	6.20	Up
Eye	51 ± 2	4 of 4	3.65	Up
Thoracicoabdominal ganglion	588 ± 3	4 of 4	41.60	Up
Salivary gland	14 ± 5	2 of 4	1.01	None
Crop	7 ± 2	2 of 4	0.60	None
Midgut	5 ± 0	0 of 4	0.40	Down
Tubule	5 ± 0	0 of 4	0.40	Down
Hindgut	4 ± 1	0 of 4	0.30	Down
Heart	4 ± 0	0 of 4	0.32	Down
Fat body	7 ± 1	0 of 4	0.54	Down
Ovary	4 ± 0	0 of 4	0.30	Down
Testis	5 ± 0	1 of 4	0.40	Down
Male accessory glands	9 ± 1	1 of 4	0.70	None
Virgin spermatheca	11 ± 2	4 of 4	0.83	None
Mated spermatheca	10 ± 2	2 of 4	0.74	None
Adult carcass	16 ± 2	3 of 4	1.20	None
Larval CNS	177 ± 14	4 of 4	12.52	Up
Larval Salivary gland	7 ± 2	0 of 4	0.52	Down
Larval midgut	2 ± 0	0 of 4	0.16	Down
Larval tubule	5 ± 1	0 of 4	0.40	Down
Larval hindgut	3 ± 1	1 of 4	0.25	Down
Larval fat body	10 ± 1	1 of 4	0.80	None
Larval trachea	5 ± 1	0 of 4	0.41	Down
Larval carcass	8 ± 0	1 of 4	0.60	Down
S2 cells (growing)	2 ± 0	0 of 4	0.17	Down
Whole fly	14 ± 1	4 of 4

CG15690 (CG42322):

Annotation Number : CG15690
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259222
Gbrowse : chr3R:16580801-16581212 (+) // 100.0 //
Probeset : 1635236_at
Accessions : protein= NP_001138089; /// NP_001138090; /// NP_001138091; /// NP_732547; /// NP_732548; /// NP_732549; /// NP_732550; /// NP_732551;, nucleotide= NM_001144617; /// NM_001144618; /// NM_001144619; /// NM_169918; /// NM_169919; /// NM_169920; /// NM_169921; /// NM_169922;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0259222.
BioGrid reports that CG15690 interacts with CG17086 CG17666 Dmel CG34168 CG7354 CG7570 CG7954 CG8216 CG8854 CG8907 CG9572 .
VDRC has 3 RNAi stocks for FBgn0259222 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	120 ± 3	4 of 4	49.00	Up
Head	20 ± 2	4 of 4	8.30	Up
Eye	14 ± 0	4 of 4	5.89	Up
Thoracicoabdominal ganglion	77 ± 7	4 of 4	31.80	Up
Salivary gland	6 ± 1	0 of 4	2.60	None
Crop	1 ± 0	0 of 4	0.60	None
Midgut	3 ± 1	0 of 4	1.20	None
Tubule	1 ± 0	0 of 4	0.60	Down
Hindgut	3 ± 1	0 of 4	1.50	None
Heart	1 ± 0	0 of 4	0.53	None
Fat body	2 ± 1	0 of 4	0.92	None
Ovary	0 ± 0	0 of 4	0.20	None
Testis	1 ± 0	0 of 4	0.60	None
Male accessory glands	1 ± 0	0 of 4	0.50	None
Virgin spermatheca	0 ± 0	0 of 4	0.37	None
Mated spermatheca	1 ± 0	0 of 4	0.43	None
Adult carcass	7 ± 3	0 of 4	3.10	None
Larval CNS	31 ± 7	4 of 4	12.78	Up
Larval Salivary gland	3 ± 1	0 of 4	1.34	None
Larval midgut	3 ± 1	0 of 4	1.48	None
Larval tubule	2 ± 1	0 of 4	1.10	None
Larval hindgut	0 ± 0	0 of 4	0.35	None
Larval fat body	2 ± 0	0 of 4	0.80	None
Larval trachea	2 ± 2	0 of 4	0.91	None
Larval carcass	3 ± 0	0 of 4	1.62	None
S2 cells (growing)	0 ± 0	0 of 4	0.38	None
Whole fly	2 ± 0	0 of 4

Looking for FBgn0259222. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720