FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0259228 through 18771 annotations produced 2 hits

C3G (C3G):

Annotation Number : CG14436
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259228
Gbrowse : chrX:6693813-6694284 (-) // 100.0 //
Probeset : 1640369_at
Accessions : protein= NP_001138166; /// NP_001138167; /// NP_001138168; /// NP_001138169; /// NP_572350; /// NP_788867;, nucleotide= NM_001144694; /// NM_001144695; /// NM_001144696; /// NM_001144697; /// NM_132122; /// NM_176694;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-n
FlyMine data for FBgn0259228.
BioGrid reports that CG14436 interacts with CG8540 .
TRiP has 1 RNAi stocks for FBgn0259228 available for purchase.
VDRC has 5 RNAi stocks for FBgn0259228 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.40	None
Head	2 ± 0	0 of 4	0.70	None
Eye	1 ± 0	0 of 4	0.60	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	1.40	None
Salivary gland	17 ± 3	0 of 4	6.12	Up
Crop	5 ± 2	0 of 4	1.70	None
Midgut	5 ± 1	0 of 4	1.90	None
Tubule	3 ± 0	0 of 4	1.10	None
Hindgut	4 ± 2	0 of 4	1.50	None
Heart	1 ± 0	0 of 4	0.37	None
Fat body	3 ± 3	0 of 4	1.31	None
Ovary	1 ± 0	0 of 4	0.50	None
Testis	1 ± 0	0 of 4	0.40	None
Male accessory glands	4 ± 2	0 of 4	1.50	None
Virgin spermatheca	1 ± 0	0 of 4	0.55	None
Mated spermatheca	5 ± 1	0 of 4	1.91	None
Adult carcass	8 ± 3	0 of 4	2.90	None
Larval CNS	3 ± 3	0 of 4	1.03	None
Larval Salivary gland	2 ± 0	0 of 4	0.90	None
Larval midgut	4 ± 0	0 of 4	1.36	None
Larval tubule	4 ± 1	0 of 4	1.50	None
Larval hindgut	3 ± 1	0 of 4	1.05	None
Larval fat body	11 ± 5	0 of 4	3.90	None
Larval trachea	2 ± 1	0 of 4	0.98	None
Larval carcass	5 ± 0	0 of 4	1.89	None
S2 cells (growing)	2 ± 0	0 of 4	0.85	None
Whole fly	2 ± 1	0 of 4

C3G (C3G):

Annotation Number : CG3126
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259228
Gbrowse : chrX:6675429-6697579 (-) // 100.0 //
Probeset : 1633115_a_at
Accessions : protein= NP_001138166; /// NP_001138167; /// NP_001138168; /// NP_001138169; /// NP_572350; /// NP_788867;, nucleotide= NM_001144694; /// NM_001144695; /// NM_001144696; /// NM_001144697; /// NM_132122; /// NM_176694;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-n
FlyMine data for FBgn0259228.
Homophila reports that CG3126 is a close match (7e-26) to human gene GF1;GINGF;HGF;NS4;SOS1 (NP_005624), a gene associated with Fibromatosis, gingival, 135300 (3);Noonan syndrome 4, 610733 (3).
BioGrid reports that CG3126 interacts with CG9375 CG12559 CG1956 CG2899 .
TRiP has 1 RNAi stocks for FBgn0259228 available for purchase.
VDRC has 5 RNAi stocks for FBgn0259228 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	276 ± 11	4 of 4	5.50	Up
Head	84 ± 6	4 of 4	1.70	Up
Eye	105 ± 5	4 of 4	2.11	Up
Thoracicoabdominal ganglion	220 ± 4	4 of 4	4.40	Up
Salivary gland	228 ± 12	4 of 4	4.57	Up
Crop	155 ± 3	4 of 4	3.10	Up
Midgut	118 ± 4	4 of 4	2.40	Up
Tubule	245 ± 30	4 of 4	4.90	Up
Hindgut	127 ± 6	4 of 4	2.50	Up
Heart	109 ± 6	4 of 4	2.20	Up
Fat body	43 ± 2	4 of 4	0.86	Down
Ovary	47 ± 1	4 of 4	0.90	None
Testis	19 ± 2	4 of 4	0.40	Down
Male accessory glands	27 ± 1	4 of 4	0.60	Down
Virgin spermatheca	39 ± 2	4 of 4	0.78	Down
Mated spermatheca	35 ± 2	4 of 4	0.71	Down
Adult carcass	78 ± 5	4 of 4	1.60	Up
Larval CNS	152 ± 12	4 of 4	3.05	Up
Larval Salivary gland	24 ± 3	0 of 4	0.49	Down
Larval midgut	67 ± 8	4 of 4	1.35	None
Larval tubule	133 ± 3	4 of 4	2.70	Up
Larval hindgut	136 ± 11	4 of 4	2.72	Up
Larval fat body	47 ± 6	4 of 4	0.90	None
Larval trachea	205 ± 21	4 of 4	4.11	Up
Larval carcass	92 ± 9	4 of 4	1.84	Up
S2 cells (growing)	236 ± 14	4 of 4	4.73	Up
Whole fly	50 ± 2	4 of 4

Looking for FBgn0259228. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720