FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0259236 through 18771 annotations produced 2 hits

comm3 (comm3):

Annotation Number : CG33209
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259236
Gbrowse : chr3L:15606403-15625550 (-) // 100.0 //
Probeset : 1623544_at
Accessions : protein= NP_648791; /// NP_788509;, nucleotide= NM_140534; /// NM_140534; /// NM_176331;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0259236.
VDRC has 5 RNAi stocks for FBgn0259236 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 0	2 of 4	0.20	Down
Head	44 ± 2	4 of 4	1.60	Up
Eye	46 ± 4	4 of 4	1.70	Up
Thoracicoabdominal ganglion	7 ± 1	2 of 4	0.30	Down
Salivary gland	46 ± 4	4 of 4	1.70	Up
Crop	61 ± 4	4 of 4	2.20	Up
Midgut	82 ± 6	4 of 4	3.00	Up
Tubule	313 ± 18	4 of 4	11.40	Up
Hindgut	955 ± 28	4 of 4	34.70	Up
Heart	10 ± 1	4 of 4	0.37	Down
Fat body	17 ± 1	4 of 4	0.61	Down
Ovary	5 ± 0	3 of 4	0.20	Down
Testis	8 ± 0	2 of 4	0.30	Down
Male accessory glands	111 ± 6	4 of 4	4.00	Up
Virgin spermatheca	13 ± 1	3 of 4	0.48	Down
Mated spermatheca	17 ± 2	4 of 4	0.62	Down
Adult carcass	28 ± 3	4 of 4	1.00	None
Larval CNS	11 ± 0	4 of 4	0.42	Down
Larval Salivary gland	26 ± 1	4 of 4	0.96	None
Larval midgut	63 ± 0	4 of 4	2.29	Up
Larval tubule	373 ± 12	4 of 4	13.50	Up
Larval hindgut	1512 ± 33	4 of 4	54.86	Up
Larval fat body	8 ± 3	1 of 4	0.30	Down
Larval trachea	7 ± 3	2 of 4	0.28	Down
Larval carcass	61 ± 2	4 of 4	2.23	Up
S2 cells (growing)	4 ± 1	0 of 4	0.16	Down
Whole fly	27 ± 2	4 of 4

comm3 (comm3):

Annotation Number : CG13446
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259236
Gbrowse : chr3L:15640052-15640717 (-) // 100.0 //
Probeset : 1630116_at
Accessions : protein= NP_648791; /// NP_788509;, nucleotide= NM_140534; /// NM_140534; /// NM_176331;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0259236.
VDRC has 5 RNAi stocks for FBgn0259236 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.80	None
Head	0 ± 0	0 of 4	0.60	None
Eye	3 ± 1	0 of 4	2.48	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	1.30	None
Salivary gland	4 ± 1	0 of 4	2.95	None
Crop	10 ± 3	0 of 4	7.20	None
Midgut	0 ± 0	0 of 4	0.60	None
Tubule	58 ± 3	3 of 4	41.80	Up
Hindgut	9 ± 1	0 of 4	6.90	Up
Heart	0 ± 0	0 of 4	0.46	None
Fat body	1 ± 0	0 of 4	0.71	None
Ovary	0 ± 0	0 of 4	0.40	Down
Testis	2 ± 0	0 of 4	1.70	None
Male accessory glands	30 ± 4	0 of 4	21.90	Up
Virgin spermatheca	0 ± 0	0 of 4	0.55	None
Mated spermatheca	1 ± 0	0 of 4	0.82	None
Adult carcass	5 ± 4	0 of 4	4.00	None
Larval CNS	1 ± 0	0 of 4	1.18	None
Larval Salivary gland	1 ± 0	0 of 4	1.04	None
Larval midgut	1 ± 0	0 of 4	1.09	None
Larval tubule	268 ± 11	4 of 4	192.10	Up
Larval hindgut	14 ± 1	0 of 4	9.96	Up
Larval fat body	1 ± 0	0 of 4	1.10	None
Larval trachea	1 ± 0	0 of 4	0.73	None
Larval carcass	3 ± 1	0 of 4	2.43	None
S2 cells (growing)	0 ± 0	0 of 4	0.48	None
Whole fly	1 ± 0	0 of 4

Looking for FBgn0259236. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720