Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0259831 through 18771 annotations produced 1 hits



CG14378 (CG34309):

Annotation Number : CT34017
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259831
Gbrowse : chr3R:9198590-9198800 (+) // 100.0 //
Probeset : 1626866_at
Accessions : protein= NP_001097771;, nucleotide= NM_001104301;
FlyMine data for FBgn0259831.
VDRC has 1 RNAi stocks for FBgn0259831 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 10 of 4 0.30None
Head62 34 of 411.10Up
Eye8 22 of 4 1.48None
Thoracicoabdominal ganglion2 20 of 4 0.40None
Salivary gland1 00 of 4 0.20None
Crop1 10 of 4 0.30None
Midgut4 20 of 4 0.80None
Tubule3 00 of 4 0.60Down
Hindgut1 00 of 4 0.30None
Heart0 00 of 4 0.10Down
Fat body3 10 of 4 0.61None
Ovary1 00 of 4 0.20None
Testis0 00 of 4 0.10Down
Male accessory glands5 30 of 4 0.90None
Virgin spermatheca1 00 of 4 0.32None
Mated spermatheca2 10 of 4 0.37None
Adult carcass1 00 of 4 0.30None
Larval CNS0 00 of 4 0.06Down
Larval Salivary gland1 00 of 4 0.23None
Larval midgut2 00 of 4 0.49None
Larval tubule2 10 of 4 0.40None
Larval hindgut1 00 of 4 0.18Down
Larval fat body2 00 of 4 0.30None
Larval trachea1 10 of 4 0.26None
Larval carcass2 00 of 4 0.36None
S2 cells (growing)3 00 of 4 0.63None
Whole fly5 13 of 4

Looking for FBgn0259831. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime