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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0259984 through 18771 annotations produced 1 hits



Kuzbanian (kuz):

Annotation Number : CG7147
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259984
Gbrowse : chr2L:13550140-13638263 (+) // 100.0 //
Probeset : 1628215_s_at
Accessions : protein= NP_001014481; /// NP_001097159; /// NP_001097160; /// NP_477187; /// NP_723825;, nucleotide= NM_001014481; /// NM_001103689; /// NM_001103690; /// NM_057839; /// NM_165047;
Pathway : engulfment // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0
FlyMine data for FBgn0259984.
BioGrid reports that CG7147 interacts with CG8365 CG5460 CG6127 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 .
VDRC has 1 RNAi stocks for FBgn0259984 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain140 ± 124 of 4 2.90Up
Head32 ± 64 of 4 0.70None
Eye43 ± 24 of 4 0.88None
Thoracicoabdominal ganglion107 ± 104 of 4 2.20Up
Salivary gland21 ± 33 of 4 0.44Down
Crop33 ± 24 of 4 0.70None
Midgut15 ± 24 of 4 0.30Down
Tubule137 ± 144 of 4 2.80Up
Hindgut61 ± 74 of 4 1.30None
Heart43 ± 64 of 4 0.89None
Fat body42 ± 164 of 4 0.87None
Ovary121 ± 54 of 4 2.50Up
Testis13 ± 14 of 4 0.30Down
Male accessory glands86 ± 44 of 4 1.80Up
Virgin spermatheca66 ± 124 of 4 1.34None
Mated spermatheca81 ± 84 of 4 1.66Up
Adult carcass19 ± 22 of 4 0.40Down
Larval CNS310 ± 814 of 4 6.34Up
Larval Salivary gland28 ± 64 of 4 0.58None
Larval midgut61 ± 124 of 4 1.25None
Larval tubule91 ± 74 of 4 1.90Up
Larval hindgut97 ± 54 of 4 1.99Up
Larval fat body199 ± 104 of 4 4.10Up
Larval trachea92 ± 64 of 4 1.89Up
Larval carcass38 ± 44 of 4 0.79None
S2 cells (growing)260 ± 174 of 4 5.31Up
Whole fly49 ± 84 of 4

Looking for FBgn0259984. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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