Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0260386 through 18771 annotations produced 1 hits



mind the gap (mtg):

Annotation Number : CG7549
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260386
Gbrowse : chr3R:4082732-4086449 (+) // 100.0 //
Probeset : 1625321_a_at
Accessions : protein= NP_001036686;, nucleotide= NM_001043221;
Pathway : 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from elect
Interpro : 0008061 // chitin binding // inferred from electronic annotation
FlyMine data for FBgn0260386.
VDRC has 1 RNAi stocks for FBgn0260386 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 04 of 4 0.40Down
Head30 ± 24 of 4 1.80Up
Eye31 ± 24 of 4 1.82Up
Thoracicoabdominal ganglion4 ± 01 of 4 0.30Down
Salivary gland27 ± 01 of 4 1.59Up
Crop70 ± 34 of 4 4.00Up
Midgut8 ± 12 of 4 0.50Down
Tubule8 ± 01 of 4 0.50Down
Hindgut69 ± 24 of 4 4.00Up
Heart11 ± 24 of 4 0.67None
Fat body11 ± 24 of 4 0.66None
Ovary6 ± 02 of 4 0.30Down
Testis11 ± 04 of 4 0.60None
Male accessory glands355 ± 214 of 420.50Up
Virgin spermatheca25 ± 14 of 4 1.48Up
Mated spermatheca26 ± 34 of 4 1.50None
Adult carcass20 ± 42 of 4 1.20None
Larval CNS21 ± 34 of 4 1.25None
Larval Salivary gland23 ± 24 of 4 1.36None
Larval midgut12 ± 12 of 4 0.69None
Larval tubule0 ± 00 of 4 0.00Down
Larval hindgut102 ± 44 of 4 5.93Up
Larval fat body3 ± 10 of 4 0.20Down
Larval trachea170 ± 114 of 4 9.87Up
Larval carcass126 ± 54 of 4 7.30Up
S2 cells (growing)12 ± 14 of 4 0.75None
Whole fly17 ± 24 of 4

Looking for FBgn0260386. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime