FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0260400 through 18771 annotations produced 1 hits

Embryonic lethal abnormal vision (elav):

Annotation Number : CG4262
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260400
Gbrowse : chrX:411256-417253 (-) // 100.0 //
Probeset : 1636615_at
Accessions : protein= NP_001014713; /// NP_001138142; /// NP_525033;, nucleotide= NM_001014713; /// NM_001144670; /// NM_080294;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0015030 // Caj
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0000900 // translation repressor activity
FlyMine data for FBgn0260400.
BioGrid reports that CG4262 interacts with CG4262 CG4396 CG4612 CG5099 .
TRiP has 1 RNAi stocks for FBgn0260400 available for purchase.
VDRC has 1 RNAi stocks for FBgn0260400 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	816 ± 22	4 of 4	29.00	Up
Head	72 ± 16	4 of 4	2.60	None
Eye	251 ± 35	4 of 4	8.95	Up
Thoracicoabdominal ganglion	394 ± 63	4 of 4	14.00	Up
Salivary gland	31 ± 7	1 of 4	1.12	None
Crop	83 ± 5	4 of 4	3.00	Up
Midgut	21 ± 1	1 of 4	0.70	None
Tubule	33 ± 3	4 of 4	1.20	None
Hindgut	76 ± 9	4 of 4	2.70	Up
Heart	59 ± 8	4 of 4	2.13	Up
Fat body	25 ± 6	4 of 4	0.91	None
Ovary	6 ± 1	1 of 4	0.20	Down
Testis	7 ± 1	2 of 4	0.20	Down
Male accessory glands	26 ± 1	4 of 4	0.90	None
Virgin spermatheca	29 ± 2	4 of 4	1.05	None
Mated spermatheca	33 ± 5	3 of 4	1.17	None
Adult carcass	28 ± 5	3 of 4	1.00	None
Larval CNS	524 ± 99	4 of 4	18.63	Up
Larval Salivary gland	18 ± 1	1 of 4	0.65	Down
Larval midgut	14 ± 2	0 of 4	0.52	Down
Larval tubule	23 ± 3	3 of 4	0.80	None
Larval hindgut	27 ± 5	4 of 4	0.98	None
Larval fat body	7 ± 0	0 of 4	0.30	Down
Larval trachea	61 ± 14	4 of 4	2.18	Up
Larval carcass	28 ± 1	1 of 4	1.00	None
S2 cells (growing)	24 ± 2	4 of 4	0.89	None
Whole fly	28 ± 3	4 of 4

Looking for FBgn0260400. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720