FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0260441 through 18771 annotations produced 1 hits

40S ribosomal protein S12 (RpS12):

Annotation Number : CG11271
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260441
Gbrowse : chr3L:13016467-13017889 (+) // 99.21 //
Probeset : 1627364_s_at
Accessions : protein= NP_729866;, nucleotide= NM_168534;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // non-traceable author statemen
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0260441.
BioGrid reports that CG11271 interacts with CG11648 CG12256 CG13811 CG15781 CG17667 CG18616 CG18854 CG2851 CG2865 CG30497 CG32705 CG33141 CG3613 CG4832 CG5099 CG5546 CG6172 CG7173 CG7285 CG7570 CG8292 CG9610 .
VDRC has 1 RNAi stocks for FBgn0260441 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2876 ± 45	4 of 4	0.70	Down
Head	4729 ± 237	4 of 4	1.10	None
Eye	5559 ± 74	4 of 4	1.33	Up
Thoracicoabdominal ganglion	4317 ± 124	4 of 4	1.00	None
Salivary gland	10578 ± 164	4 of 4	2.52	Up
Crop	5840 ± 291	4 of 4	1.40	Up
Midgut	4961 ± 57	4 of 4	1.20	None
Tubule	5798 ± 88	4 of 4	1.40	Up
Hindgut	4518 ± 105	4 of 4	1.10	None
Heart	6127 ± 437	4 of 4	1.46	Up
Fat body	5360 ± 691	4 of 4	1.28	Up
Ovary	3465 ± 37	4 of 4	0.80	None
Testis	1181 ± 26	4 of 4	0.30	Down
Male accessory glands	10185 ± 300	4 of 4	2.40	Up
Virgin spermatheca	5824 ± 227	4 of 4	1.39	Up
Mated spermatheca	6010 ± 253	4 of 4	1.43	Up
Adult carcass	5644 ± 324	4 of 4	1.30	Up
Larval CNS	2634 ± 190	4 of 4	0.63	Down
Larval Salivary gland	7373 ± 380	4 of 4	1.76	Up
Larval midgut	4565 ± 109	4 of 4	1.09	None
Larval tubule	5166 ± 56	4 of 4	1.20	Up
Larval hindgut	4233 ± 39	4 of 4	1.01	None
Larval fat body	7900 ± 864	4 of 4	1.90	Up
Larval trachea	5816 ± 195	4 of 4	1.39	Up
Larval carcass	4607 ± 350	4 of 4	1.10	None
S2 cells (growing)	4290 ± 99	4 of 4	1.02	None
Whole fly	4195 ± 248	4 of 4

Looking for FBgn0260441. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720