FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0260632 through 18771 annotations produced 2 hits

(March 2006 (FlyBase/BDGP 5.3)):

Annotation Number : CG6667
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : dl
Gbrowse :
Probeset : 1639692_s_at
Accessions : protein= C7LA93 /// P15330, nucleotide=
FlyMine data for dl.
BioGrid reports that CG6667 interacts with CG6707 CG7583 CG8965 CG9453 CG5848 CG5848 CG6794 CG17603 CG9224 Dmel CG33957 CG3018 CG4494 CG15367 CG9771 CG12767 CG3018 CG2956 CG5848 CG4057 CG4057 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	24 ± 1	4 of 4	0.10	Down
Head	104 ± 3	4 of 4	0.60	Down
Eye	88 ± 3	4 of 4	0.51	Down
Thoracicoabdominal ganglion	34 ± 1	4 of 4	0.20	Down
Salivary gland	616 ± 23	4 of 4	3.52	Up
Crop	834 ± 35	4 of 4	4.80	Up
Midgut	181 ± 4	4 of 4	1.00	None
Tubule	78 ± 5	4 of 4	0.40	Down
Hindgut	273 ± 7	4 of 4	1.60	Up
Heart	25 ± 2	4 of 4	0.14	Down
Fat body	22 ± 7	1 of 4	0.13	Down
Ovary	367 ± 2	4 of 4	2.10	Up
Testis	48 ± 3	4 of 4	0.30	Down
Male accessory glands	22 ± 3	3 of 4	0.10	Down
Virgin spermatheca	82 ± 3	4 of 4	0.47	Down
Mated spermatheca	93 ± 11	4 of 4	0.53	Down
Adult carcass	123 ± 6	4 of 4	0.70	Down
Larval CNS	34 ± 8	4 of 4	0.19	Down
Larval Salivary gland	199 ± 19	4 of 4	1.14	None
Larval midgut	260 ± 6	4 of 4	1.48	Up
Larval tubule	47 ± 4	4 of 4	0.30	Down
Larval hindgut	118 ± 1	4 of 4	0.68	Down
Larval fat body	54 ± 4	4 of 4	0.30	Down
Larval trachea	231 ± 22	4 of 4	1.32	Up
Larval carcass	111 ± 14	4 of 4	0.64	Down
S2 cells (growing)	344 ± 4	4 of 4	1.97	Up
Whole fly	175 ± 8	4 of 4

(March 2006 (FlyBase/BDGP 5.3)):

Annotation Number : CG6667
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : dl
Gbrowse :
Probeset : 1623415_at
Accessions : protein= C7LA93 /// P15330, nucleotide=
FlyMine data for dl.
BioGrid reports that CG6667 interacts with CG6707 CG7583 CG8965 CG9453 CG5848 CG5848 CG6794 CG17603 CG9224 Dmel CG33957 CG3018 CG4494 CG15367 CG9771 CG12767 CG3018 CG2956 CG5848 CG4057 CG4057 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	26 ± 1	4 of 4	0.40	Down
Head	87 ± 5	4 of 4	1.20	None
Eye	24 ± 2	4 of 4	0.35	Down
Thoracicoabdominal ganglion	42 ± 2	4 of 4	0.60	Down
Salivary gland	42 ± 9	2 of 4	0.59	None
Crop	432 ± 12	4 of 4	6.10	Up
Midgut	71 ± 5	4 of 4	1.00	None
Tubule	23 ± 4	3 of 4	0.30	Down
Hindgut	191 ± 7	4 of 4	2.70	Up
Heart	250 ± 22	4 of 4	3.54	Up
Fat body	26 ± 9	3 of 4	0.38	Down
Ovary	8 ± 0	3 of 4	0.10	Down
Testis	15 ± 0	4 of 4	0.20	Down
Male accessory glands	41 ± 4	4 of 4	0.60	Down
Virgin spermatheca	32 ± 2	4 of 4	0.46	Down
Mated spermatheca	45 ± 4	4 of 4	0.64	Down
Adult carcass	207 ± 7	4 of 4	2.90	Up
Larval CNS	30 ± 4	4 of 4	0.43	Down
Larval Salivary gland	23 ± 3	4 of 4	0.34	Down
Larval midgut	38 ± 4	4 of 4	0.54	Down
Larval tubule	12 ± 0	4 of 4	0.20	Down
Larval hindgut	102 ± 5	4 of 4	1.45	Up
Larval fat body	23 ± 4	3 of 4	0.30	Down
Larval trachea	37 ± 4	4 of 4	0.53	Down
Larval carcass	406 ± 6	4 of 4	5.75	Up
S2 cells (growing)	133 ± 8	4 of 4	1.88	Up
Whole fly	70 ± 7	4 of 4

Looking for FBgn0260632. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720