FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0260745 through 18771 annotations produced 1 hits

Midline Fasciclin (mfas):

Annotation Number : CG3359
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260745
Gbrowse : chr3R:7810583-7819037 (-) // 100.0 //
Probeset : 1632298_s_at
Accessions : protein= NP_524324; /// NP_731661; /// NP_788643; /// NP_788644; /// NP_788645; /// NP_788646; /// NP_788647; /// NP_788648; /// NP_788649; /// NP_788650; /// NP_788651; /// NP_788652; /// NP_788653; /// NP_788654; /// NP_788655;, nucleotide= NM_079600; /// NM_169444; /// NM_176466; /// NM_176467; /// NM_176468; /// NM_176469; /// NM_176470; /// NM_176471; /// NM_176472; /// NM_176473; /// NM_176474; /// NM_176475; /// NM_176476; /// NM_176477; /// NM_176478;
Pathway : 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statemen
FlyMine data for FBgn0260745.
Homophila reports that CG3359 is a close match (5e-24) to human gene BIGH3;CDG2;CDGG1;CSD;CSD2;EBMD;TGFBI (NP_000349), a gene associated with Corneal dystrophy, Avellino type, 607541 (3);Corneal dystrophy, epithelial basement membrane, 121820 (3);Corneal dystrophy, Groenouw type I, 121900 (3);Corneal dystrophy, lattice type I, 122200 (3);Corneal dystrophy, lattice type IIIA, 608471 (3);Corneal dystrophy, Reis-Bucklers type, 608470 (3);Corneal dystrophy, Thiel-Behnke type, 602082 (3).
VDRC has 3 RNAi stocks for FBgn0260745 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1197 ± 41	4 of 4	3.30	Up
Head	733 ± 33	4 of 4	2.00	Up
Eye	265 ± 16	4 of 4	0.74	Down
Thoracicoabdominal ganglion	1603 ± 54	4 of 4	4.40	Up
Salivary gland	462 ± 77	4 of 4	1.28	None
Crop	426 ± 12	4 of 4	1.20	Up
Midgut	117 ± 8	4 of 4	0.30	Down
Tubule	16 ± 1	1 of 4	0.00	Down
Hindgut	1391 ± 50	4 of 4	3.90	Up
Heart	68 ± 9	4 of 4	0.19	Down
Fat body	40 ± 6	4 of 4	0.11	Down
Ovary	106 ± 18	4 of 4	0.30	Down
Testis	464 ± 23	4 of 4	1.30	Up
Male accessory glands	8659 ± 232	4 of 4	24.00	Up
Virgin spermatheca	102 ± 5	4 of 4	0.29	Down
Mated spermatheca	135 ± 10	4 of 4	0.37	Down
Adult carcass	279 ± 11	4 of 4	0.80	Down
Larval CNS	214 ± 12	4 of 4	0.59	Down
Larval Salivary gland	329 ± 13	4 of 4	0.91	None
Larval midgut	113 ± 8	4 of 4	0.31	Down
Larval tubule	16 ± 3	4 of 4	0.00	Down
Larval hindgut	777 ± 50	4 of 4	2.16	Up
Larval fat body	418 ± 54	4 of 4	1.20	None
Larval trachea	4359 ± 243	4 of 4	12.09	Up
Larval carcass	188 ± 11	4 of 4	0.52	Down
S2 cells (growing)	1246 ± 45	4 of 4	3.46	Up
Whole fly	360 ± 6	4 of 4

Looking for FBgn0260745. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720