FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0260749 through 18771 annotations produced 1 hits

CG5640 (Utx):

Annotation Number : CG5640
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260749
Gbrowse : chr2L:10272651-10278811 (-) // 100.0 //
Probeset : 1635202_s_at
Accessions : protein= NP_609368; /// NP_723550; /// NP_723551;, nucleotide= NM_135524; /// NM_164907; /// NM_164908;
Pathway : 0005705 // polytene chromosome interband // inferred from direct assay
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical inter
FlyMine data for FBgn0260749.
BioGrid reports that CG5640 interacts with CG7926 CG8340 CG7977 .
TRiP has 1 RNAi stocks for FBgn0260749 available for purchase.
VDRC has 3 RNAi stocks for FBgn0260749 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	181 ± 9	4 of 4	1.60	Up
Head	73 ± 3	4 of 4	0.70	Down
Eye	117 ± 4	4 of 4	1.05	None
Thoracicoabdominal ganglion	146 ± 11	4 of 4	1.30	Up
Salivary gland	191 ± 6	4 of 4	1.71	Up
Crop	107 ± 5	4 of 4	1.00	None
Midgut	75 ± 5	4 of 4	0.70	Down
Tubule	106 ± 5	4 of 4	1.00	None
Hindgut	80 ± 3	4 of 4	0.70	Down
Heart	70 ± 5	4 of 4	0.62	Down
Fat body	47 ± 2	4 of 4	0.42	Down
Ovary	235 ± 4	4 of 4	2.10	Up
Testis	138 ± 6	4 of 4	1.20	Up
Male accessory glands	62 ± 4	4 of 4	0.60	Down
Virgin spermatheca	94 ± 5	4 of 4	0.84	Down
Mated spermatheca	97 ± 4	4 of 4	0.87	None
Adult carcass	71 ± 3	4 of 4	0.60	Down
Larval CNS	197 ± 4	4 of 4	1.76	Up
Larval Salivary gland	125 ± 15	4 of 4	1.12	None
Larval midgut	46 ± 5	4 of 4	0.42	Down
Larval tubule	91 ± 2	4 of 4	0.80	Down
Larval hindgut	42 ± 1	4 of 4	0.38	Down
Larval fat body	132 ± 4	4 of 4	1.20	Up
Larval trachea	106 ± 7	4 of 4	0.95	None
Larval carcass	74 ± 18	4 of 4	0.66	None
S2 cells (growing)	145 ± 8	4 of 4	1.30	Up
Whole fly	112 ± 4	4 of 4

Looking for FBgn0260749. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720