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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0260750 through 18771 annotations produced 1 hits



anon-31BCb (CG31873):

Annotation Number : CG31873
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260750
Gbrowse : chr2L:10270090-10271527 (+) // 100.0 //
Probeset : 1626978_at
Accessions : protein= NP_723549;, nucleotide= NM_164906;
Interpro : 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0016740 // transferase activity //
FlyMine data for FBgn0260750.
TRiP has 1 RNAi stocks for FBgn0260750 available for purchase.
VDRC has 3 RNAi stocks for FBgn0260750 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain79 ± 74 of 4 0.90None
Head68 ± 44 of 4 0.80Down
Eye77 ± 14 of 4 0.88None
Thoracicoabdominal ganglion124 ± 54 of 4 1.40Up
Salivary gland65 ± 44 of 4 0.74Down
Crop95 ± 34 of 4 1.10None
Midgut59 ± 24 of 4 0.70Down
Tubule127 ± 24 of 4 1.40Up
Hindgut72 ± 64 of 4 0.80None
Heart73 ± 34 of 4 0.83Down
Fat body133 ± 254 of 4 1.51Up
Ovary171 ± 54 of 4 1.90Up
Testis143 ± 54 of 4 1.60Up
Male accessory glands41 ± 24 of 4 0.50Down
Virgin spermatheca133 ± 104 of 4 1.52Up
Mated spermatheca140 ± 34 of 4 1.60Up
Adult carcass67 ± 44 of 4 0.80Down
Larval CNS125 ± 54 of 4 1.43Up
Larval Salivary gland77 ± 24 of 4 0.88None
Larval midgut58 ± 44 of 4 0.66Down
Larval tubule58 ± 24 of 4 0.70Down
Larval hindgut128 ± 34 of 4 1.45Up
Larval fat body64 ± 64 of 4 0.70Down
Larval trachea83 ± 64 of 4 0.95None
Larval carcass75 ± 74 of 4 0.85None
S2 cells (growing)67 ± 24 of 4 0.76Down
Whole fly88 ± 34 of 4

Looking for FBgn0260750. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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