FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0260812 through 18771 annotations produced 2 hits

CG42447 /// inaF (inaF-B /// inaF-D):

Annotation Number : CG2457
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259918 /// FBgn0260812
Gbrowse : chrX:11618700-11626803 (-) // 100.0 //
Probeset : 1633646_at
Accessions : protein= NP_001096958; /// NP_001162726;, nucleotide= NM_001103488; /// NM_001169255;
Pathway : 0016020 // membrane // inferred from sequence or structural similarity /// 0016027 // inaD signaling complex // inferred
Interpro : 0005246 // calcium channel regulator activity // inferred from genetic interaction /// 0005246 // calcium channel regula
FlyMine data for FBgn0259918 /// FBgn0260812.
BioGrid reports that CG2457 interacts with CG7875 CG18345 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	130 ± 8	4 of 4	0.40	Down
Head	2724 ± 148	4 of 4	8.60	Up
Eye	6743 ± 189	4 of 4	21.24	Up
Thoracicoabdominal ganglion	32 ± 1	4 of 4	0.10	Down
Salivary gland	9 ± 6	0 of 4	0.03	Down
Crop	5 ± 1	0 of 4	0.00	Down
Midgut	2 ± 0	0 of 4	0.00	Down
Tubule	8 ± 1	1 of 4	0.00	Down
Hindgut	3 ± 1	0 of 4	0.00	Down
Heart	16 ± 4	3 of 4	0.05	Down
Fat body	6 ± 1	1 of 4	0.02	Down
Ovary	11 ± 0	4 of 4	0.00	Down
Testis	6 ± 0	1 of 4	0.00	Down
Male accessory glands	8 ± 2	0 of 4	0.00	Down
Virgin spermatheca	6 ± 0	0 of 4	0.02	Down
Mated spermatheca	6 ± 1	1 of 4	0.02	Down
Adult carcass	8 ± 1	0 of 4	0.00	Down
Larval CNS	6 ± 2	4 of 4	0.02	Down
Larval Salivary gland	1 ± 0	0 of 4	0.01	Down
Larval midgut	3 ± 0	0 of 4	0.01	Down
Larval tubule	2 ± 1	0 of 4	0.00	Down
Larval hindgut	4 ± 0	0 of 4	0.01	Down
Larval fat body	1 ± 0	0 of 4	0.00	Down
Larval trachea	261 ± 506	2 of 4	0.82	None
Larval carcass	3 ± 1	0 of 4	0.01	Down
S2 cells (growing)	1 ± 0	0 of 4	0.00	Down
Whole fly	317 ± 21	4 of 4

inaF (inaF-D):

Annotation Number : S.CX001291
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260812
Gbrowse : chrX:11622621-11622847 (-) // 100.0 //
Probeset : 1630525_at
Accessions : protein= NP_001096958;, nucleotide= NM_001103488;
Pathway : 0016020 // membrane // inferred from sequence or structural similarity
Interpro : 0005246 // calcium channel regulator activity // inferred from genetic interaction /// 0005246 // calcium channel regula
FlyMine data for FBgn0260812.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	19 ± 2	1 of 4	1.00	None
Head	16 ± 1	0 of 4	0.90	None
Eye	12 ± 2	0 of 4	0.68	None
Thoracicoabdominal ganglion	16 ± 4	0 of 4	0.90	None
Salivary gland	36 ± 6	0 of 4	1.96	None
Crop	24 ± 5	0 of 4	1.30	None
Midgut	29 ± 4	0 of 4	1.60	None
Tubule	20 ± 0	0 of 4	1.10	None
Hindgut	26 ± 3	0 of 4	1.40	None
Heart	5 ± 1	0 of 4	0.29	Down
Fat body	24 ± 5	0 of 4	1.31	None
Ovary	18 ± 2	1 of 4	1.00	None
Testis	11 ± 2	0 of 4	0.60	Down
Male accessory glands	37 ± 6	2 of 4	2.00	None
Virgin spermatheca	17 ± 4	0 of 4	0.93	None
Mated spermatheca	15 ± 3	1 of 4	0.83	None
Adult carcass	43 ± 11	0 of 4	2.30	None
Larval CNS	15 ± 2	3 of 4	0.83	None
Larval Salivary gland	28 ± 4	3 of 4	1.50	None
Larval midgut	24 ± 1	0 of 4	1.31	Up
Larval tubule	16 ± 3	0 of 4	0.90	None
Larval hindgut	19 ± 2	0 of 4	1.02	None
Larval fat body	33 ± 3	1 of 4	1.80	Up
Larval trachea	11 ± 4	0 of 4	0.62	Down
Larval carcass	12 ± 2	0 of 4	0.65	None
S2 cells (growing)	12 ± 1	0 of 4	0.69	Down
Whole fly	18 ± 1	0 of 4

Looking for FBgn0260812. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720