FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0260862 through 18771 annotations produced 1 hits

Vti1 (Vti1):

Annotation Number : CG3279
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260862
Gbrowse : chr3L:691485-692915 (-) // 99.64 //
Probeset : 1638927_at
Accessions : protein= NP_612053;, nucleotide= NM_138209;
Pathway : 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from e
Interpro : 0005484 // SNAP receptor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // i
FlyMine data for FBgn0260862.
BioGrid reports that CG3279 interacts with CG4821 .
TRiP has 1 RNAi stocks for FBgn0260862 available for purchase.
VDRC has 3 RNAi stocks for FBgn0260862 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	317 ± 4	4 of 4	2.00	Up
Head	169 ± 7	4 of 4	1.10	None
Eye	243 ± 24	4 of 4	1.57	Up
Thoracicoabdominal ganglion	317 ± 6	4 of 4	2.00	Up
Salivary gland	300 ± 15	4 of 4	1.93	Up
Crop	150 ± 8	4 of 4	1.00	None
Midgut	121 ± 4	4 of 4	0.80	None
Tubule	173 ± 3	4 of 4	1.10	Up
Hindgut	114 ± 5	4 of 4	0.70	None
Heart	110 ± 6	4 of 4	0.71	None
Fat body	136 ± 7	4 of 4	0.88	None
Ovary	404 ± 7	4 of 4	2.60	Up
Testis	55 ± 4	4 of 4	0.40	Down
Male accessory glands	133 ± 2	4 of 4	0.90	None
Virgin spermatheca	152 ± 12	4 of 4	0.98	None
Mated spermatheca	170 ± 12	4 of 4	1.10	None
Adult carcass	97 ± 9	4 of 4	0.60	Down
Larval CNS	171 ± 1	4 of 4	1.10	None
Larval Salivary gland	220 ± 17	4 of 4	1.42	Up
Larval midgut	124 ± 4	4 of 4	0.80	None
Larval tubule	231 ± 13	4 of 4	1.50	Up
Larval hindgut	101 ± 5	4 of 4	0.65	Down
Larval fat body	98 ± 5	4 of 4	0.60	Down
Larval trachea	59 ± 3	4 of 4	0.38	Down
Larval carcass	69 ± 4	4 of 4	0.44	Down
S2 cells (growing)	137 ± 4	4 of 4	0.89	None
Whole fly	155 ± 14	4 of 4

Looking for FBgn0260862. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720