FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0260934 through 18771 annotations produced 3 hits

Par-1 kinase (par-1):

Annotation Number : S.C2R002042
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260934
Gbrowse : chr2R:15371296-15371608 (+) // 100.0 //
Probeset : 1625544_s_at
Accessions : protein= NP_001014539; /// NP_001014540; /// NP_001014541; /// NP_001014542; /// NP_001163208; /// NP_001163209; /// NP_001163210; /// NP_001163211; /// NP_995890; /// NP_995891; /// NP_995892; /// NP_995893; /// NP_995894; /// NP_995895; /// NP_995896; /// NP_995897; /// NP_995898; /// NP_995899; /// NP_995900;, nucleotide= NM_001014539; /// NM_001014540; /// NM_001014541; /// NM_001014542; /// NM_001169737; /// NM_001169738; /// NM_001169739; /// NM_001169740; /// NM_206168; /// NM_206169; /// NM_206170; /// NM_206171; /// NM_206172; /// NM_206173; /// NM_206174; /// NM_206175; /// NM_206176; /// NM_206177; /// NM_206178;
Pathway : 0005694 // chromosome // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay //
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electro
FlyMine data for FBgn0260934.
TRiP has 2 RNAi stocks for FBgn0260934 available for purchase.
VDRC has 2 RNAi stocks for FBgn0260934 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	120 ± 2	4 of 4	2.60	Up
Head	59 ± 5	4 of 4	1.30	None
Eye	28 ± 0	4 of 4	0.61	Down
Thoracicoabdominal ganglion	77 ± 8	4 of 4	1.70	Up
Salivary gland	45 ± 4	4 of 4	0.98	None
Crop	92 ± 0	4 of 4	2.00	Up
Midgut	22 ± 1	4 of 4	0.50	Down
Tubule	63 ± 3	4 of 4	1.40	Up
Hindgut	89 ± 4	4 of 4	1.90	Up
Heart	38 ± 1	4 of 4	0.83	None
Fat body	58 ± 16	4 of 4	1.28	None
Ovary	91 ± 2	4 of 4	2.00	Up
Testis	13 ± 2	4 of 4	0.30	Down
Male accessory glands	26 ± 3	4 of 4	0.60	Down
Virgin spermatheca	26 ± 2	4 of 4	0.59	Down
Mated spermatheca	18 ± 1	4 of 4	0.39	Down
Adult carcass	69 ± 6	4 of 4	1.50	Up
Larval CNS	58 ± 5	4 of 4	1.28	Up
Larval Salivary gland	59 ± 3	4 of 4	1.29	Up
Larval midgut	23 ± 1	4 of 4	0.52	Down
Larval tubule	73 ± 2	4 of 4	1.60	Up
Larval hindgut	62 ± 3	4 of 4	1.37	Up
Larval fat body	50 ± 2	4 of 4	1.10	None
Larval trachea	36 ± 8	4 of 4	0.79	None
Larval carcass	34 ± 2	4 of 4	0.76	Down
S2 cells (growing)	135 ± 5	4 of 4	2.95	Up
Whole fly	45 ± 3	4 of 4

Par-1 kinase (par-1):

Annotation Number : CG30131
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260934
Gbrowse : chr2R:15349952-15353274 (+) // 100.0 //
Probeset : 1627121_s_at
Accessions : protein= NP_001014539; /// NP_001014540; /// NP_001014541; /// NP_001014542; /// NP_001163208; /// NP_001163209; /// NP_001163210; /// NP_001163211; /// NP_995890; /// NP_995891; /// NP_995892; /// NP_995893; /// NP_995894; /// NP_995895; /// NP_995896; /// NP_995897; /// NP_995898; /// NP_995899; /// NP_995900;, nucleotide= NM_001014539; /// NM_001014540; /// NM_001014541; /// NM_001014542; /// NM_001169737; /// NM_001169738; /// NM_001169739; /// NM_001169740; /// NM_206168; /// NM_206169; /// NM_206170; /// NM_206171; /// NM_206172; /// NM_206173; /// NM_206174; /// NM_206175; /// NM_206176; /// NM_206177; /// NM_206178;
Pathway : 0005694 // chromosome // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay //
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electro
FlyMine data for FBgn0260934.
TRiP has 2 RNAi stocks for FBgn0260934 available for purchase.
VDRC has 2 RNAi stocks for FBgn0260934 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	18 ± 1	0 of 4	4.90	Up
Head	7 ± 2	0 of 4	1.90	None
Eye	9 ± 3	2 of 4	2.62	None
Thoracicoabdominal ganglion	8 ± 4	0 of 4	2.40	None
Salivary gland	4 ± 1	0 of 4	1.32	None
Crop	22 ± 1	0 of 4	6.20	Up
Midgut	10 ± 1	0 of 4	3.00	Up
Tubule	13 ± 1	0 of 4	3.70	Up
Hindgut	18 ± 0	0 of 4	5.10	Up
Heart	5 ± 1	0 of 4	1.61	None
Fat body	3 ± 3	0 of 4	0.99	None
Ovary	1 ± 0	0 of 4	0.50	None
Testis	1 ± 0	0 of 4	0.30	None
Male accessory glands	7 ± 2	0 of 4	2.10	None
Virgin spermatheca	2 ± 1	0 of 4	0.74	None
Mated spermatheca	2 ± 0	0 of 4	0.56	None
Adult carcass	6 ± 2	0 of 4	1.70	None
Larval CNS	4 ± 2	0 of 4	1.19	None
Larval Salivary gland	3 ± 1	0 of 4	1.08	None
Larval midgut	2 ± 0	0 of 4	0.65	None
Larval tubule	17 ± 1	0 of 4	4.70	Up
Larval hindgut	9 ± 2	0 of 4	2.61	None
Larval fat body	2 ± 1	0 of 4	0.80	None
Larval trachea	5 ± 1	0 of 4	1.42	None
Larval carcass	2 ± 1	0 of 4	0.71	None
S2 cells (growing)	47 ± 1	0 of 4	12.95	Up
Whole fly	3 ± 1	0 of 4

Par-1 kinase (par-1):

Annotation Number : CG30132
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260934
Gbrowse : chr2R:15350488-15370547 (+) // 100.0 //
Probeset : 1625561_s_at
Accessions : protein= NP_001014539; /// NP_001014540; /// NP_001014541; /// NP_001014542; /// NP_001163208; /// NP_001163209; /// NP_001163210; /// NP_001163211; /// NP_995890; /// NP_995891; /// NP_995892; /// NP_995893; /// NP_995894; /// NP_995895; /// NP_995896; /// NP_995897; /// NP_995898; /// NP_995899; /// NP_995900;, nucleotide= NM_001014539; /// NM_001014540; /// NM_001014541; /// NM_001014542; /// NM_001169737; /// NM_001169738; /// NM_001169739; /// NM_001169740; /// NM_206168; /// NM_206169; /// NM_206170; /// NM_206171; /// NM_206172; /// NM_206173; /// NM_206174; /// NM_206175; /// NM_206176; /// NM_206177; /// NM_206178;
Pathway : 0005694 // chromosome // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay //
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electro
FlyMine data for FBgn0260934.
TRiP has 2 RNAi stocks for FBgn0260934 available for purchase.
VDRC has 2 RNAi stocks for FBgn0260934 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	10 ± 0	4 of 4	2.10	None
Head	3 ± 0	0 of 4	0.70	None
Eye	4 ± 1	1 of 4	0.95	None
Thoracicoabdominal ganglion	8 ± 2	2 of 4	1.70	None
Salivary gland	5 ± 2	0 of 4	1.09	None
Crop	8 ± 1	1 of 4	1.90	None
Midgut	4 ± 1	0 of 4	1.00	None
Tubule	3 ± 0	0 of 4	0.80	None
Hindgut	5 ± 0	0 of 4	1.10	None
Heart	4 ± 1	0 of 4	1.05	None
Fat body	7 ± 2	1 of 4	1.53	None
Ovary	1 ± 0	0 of 4	0.30	None
Testis	4 ± 0	0 of 4	1.00	None
Male accessory glands	3 ± 1	0 of 4	0.70	None
Virgin spermatheca	2 ± 1	0 of 4	0.46	None
Mated spermatheca	3 ± 1	0 of 4	0.79	None
Adult carcass	5 ± 1	0 of 4	1.20	None
Larval CNS	3 ± 2	2 of 4	0.78	None
Larval Salivary gland	8 ± 1	1 of 4	1.88	None
Larval midgut	3 ± 1	0 of 4	0.76	None
Larval tubule	7 ± 0	2 of 4	1.70	None
Larval hindgut	4 ± 1	0 of 4	0.89	None
Larval fat body	5 ± 2	0 of 4	1.30	None
Larval trachea	3 ± 2	0 of 4	0.78	None
Larval carcass	1 ± 0	0 of 4	0.34	None
S2 cells (growing)	4 ± 0	0 of 4	0.89	None
Whole fly	4 ± 1	1 of 4

Looking for FBgn0260934. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720