FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0260940 through 18771 annotations produced 1 hits

larsen (lsn):

Annotation Number : CG6637
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260940
Gbrowse : chr3R:17690921-17691894 (+) // 100.0 //
Probeset : 1639430_at
Accessions : protein= NP_650987;, nucleotide= NM_142730;
FlyMine data for FBgn0260940.
BioGrid reports that CG6637 interacts with CG8807 .
TRiP has 1 RNAi stocks for FBgn0260940 available for purchase.
VDRC has 2 RNAi stocks for FBgn0260940 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	123 ± 4	4 of 4	1.40	Up
Head	102 ± 6	4 of 4	1.10	None
Eye	118 ± 6	4 of 4	1.30	Up
Thoracicoabdominal ganglion	128 ± 3	4 of 4	1.40	Up
Salivary gland	213 ± 7	4 of 4	2.33	Up
Crop	108 ± 2	4 of 4	1.20	Up
Midgut	101 ± 4	4 of 4	1.10	None
Tubule	117 ± 7	4 of 4	1.30	Up
Hindgut	109 ± 4	4 of 4	1.20	Up
Heart	93 ± 4	4 of 4	1.02	None
Fat body	85 ± 5	4 of 4	0.93	None
Ovary	105 ± 4	4 of 4	1.10	None
Testis	47 ± 1	4 of 4	0.50	Down
Male accessory glands	131 ± 6	4 of 4	1.40	Up
Virgin spermatheca	113 ± 5	4 of 4	1.24	Up
Mated spermatheca	123 ± 9	4 of 4	1.35	Up
Adult carcass	91 ± 4	4 of 4	1.00	None
Larval CNS	168 ± 16	4 of 4	1.84	Up
Larval Salivary gland	149 ± 15	4 of 4	1.64	Up
Larval midgut	98 ± 5	4 of 4	1.08	None
Larval tubule	153 ± 3	4 of 4	1.70	Up
Larval hindgut	96 ± 5	4 of 4	1.05	None
Larval fat body	97 ± 8	4 of 4	1.10	None
Larval trachea	105 ± 3	4 of 4	1.15	None
Larval carcass	92 ± 7	4 of 4	1.01	None
S2 cells (growing)	155 ± 0	4 of 4	1.71	Up
Whole fly	91 ± 5	4 of 4

Looking for FBgn0260940. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720