FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0260945 through 18771 annotations produced 1 hits

Autophagy-specific gene 1 (Atg1):

Annotation Number : CG10967
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260945
Gbrowse : chr3L:12778230-12798214 (-) // 100.0 //
Probeset : 1627886_at
Accessions : protein= NP_001163433; /// NP_648601;, nucleotide= NM_001169962; /// NM_140344;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0260945.
Homophila reports that CG10967 is a close match (5e-11) to human gene ERBB2;HER2;NEU;NGL (NP_004439), a gene associated with Adenocarcinoma of lung, somatic, 211980 (3);Gastric cancer, somatic, 137215 (3);Glioblastoma, somatic, 137800 (3);Ovarian cancer, somatic, (3).
BioGrid reports that CG10967 interacts with CG16719 CG8609 CG9046 CG15006 CG17508 CG5708 CG11182 CG17046 CG2944 CG14816 CG5731 CG31679 CG31811 CG7331 CG9930 CG8963 CG4184 CG32169 .
TRiP has 2 RNAi stocks for FBgn0260945 available for purchase.
VDRC has 1 RNAi stocks for FBgn0260945 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	770 ± 10	4 of 4	3.90	Up
Head	340 ± 9	4 of 4	1.70	Up
Eye	367 ± 7	4 of 4	1.85	Up
Thoracicoabdominal ganglion	751 ± 17	4 of 4	3.80	Up
Salivary gland	369 ± 9	4 of 4	1.86	Up
Crop	308 ± 11	4 of 4	1.60	Up
Midgut	247 ± 6	4 of 4	1.20	Up
Tubule	274 ± 45	4 of 4	1.40	None
Hindgut	202 ± 6	4 of 4	1.00	None
Heart	282 ± 2	4 of 4	1.42	Up
Fat body	531 ± 23	4 of 4	2.68	Up
Ovary	326 ± 8	4 of 4	1.60	Up
Testis	58 ± 4	4 of 4	0.30	Down
Male accessory glands	104 ± 3	4 of 4	0.50	Down
Virgin spermatheca	335 ± 10	4 of 4	1.69	Up
Mated spermatheca	303 ± 12	4 of 4	1.53	Up
Adult carcass	316 ± 12	4 of 4	1.60	Up
Larval CNS	380 ± 21	4 of 4	1.92	Up
Larval Salivary gland	221 ± 8	4 of 4	1.12	None
Larval midgut	203 ± 41	4 of 4	1.02	None
Larval tubule	444 ± 50	4 of 4	2.20	Up
Larval hindgut	177 ± 15	4 of 4	0.89	None
Larval fat body	443 ± 110	4 of 4	2.20	None
Larval trachea	161 ± 19	4 of 4	0.81	Down
Larval carcass	188 ± 33	4 of 4	0.95	None
S2 cells (growing)	201 ± 8	4 of 4	1.01	None
Whole fly	198 ± 10	4 of 4

Looking for FBgn0260945. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720