FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0260959 through 18771 annotations produced 2 hits

Microcephalin (MCPH1):

Annotation Number : CG30038
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260959
Gbrowse : chr2R:7783495-7784193 (-) // 100.0 //
Probeset : 1628629_at
Accessions : protein= NP_001163122; /// NP_001163123; /// NP_610711; /// NP_725088;, nucleotide= NM_001169651; /// NM_001169652; /// NM_136867; /// NM_165852;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay
FlyMine data for FBgn0260959.
Homophila reports that CG30038 is a close match (2e-22) to human gene MCPH1 (NP_078872), a gene associated with Microcephaly, autosomal recessive 1, 251200 (3);Premature chromosome condensation with microcephaly and mental retardation, 606858 (3).
TRiP has 1 RNAi stocks for FBgn0260959 available for purchase.
VDRC has 5 RNAi stocks for FBgn0260959 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	13 ± 1	4 of 4	0.10	Down
Head	27 ± 2	4 of 4	0.10	Down
Eye	20 ± 1	4 of 4	0.10	Down
Thoracicoabdominal ganglion	18 ± 1	2 of 4	0.10	Down
Salivary gland	116 ± 8	4 of 4	0.56	Down
Crop	49 ± 4	4 of 4	0.20	Down
Midgut	68 ± 2	4 of 4	0.30	Down
Tubule	429 ± 42	4 of 4	2.10	Up
Hindgut	54 ± 3	4 of 4	0.30	Down
Heart	79 ± 1	4 of 4	0.39	Down
Fat body	82 ± 16	4 of 4	0.40	Down
Ovary	237 ± 5	4 of 4	1.10	None
Testis	1357 ± 34	4 of 4	6.50	Up
Male accessory glands	107 ± 4	4 of 4	0.50	Down
Virgin spermatheca	51 ± 3	4 of 4	0.25	Down
Mated spermatheca	54 ± 4	4 of 4	0.26	Down
Adult carcass	86 ± 8	4 of 4	0.40	Down
Larval CNS	71 ± 6	4 of 4	0.35	Down
Larval Salivary gland	125 ± 10	4 of 4	0.60	Down
Larval midgut	73 ± 6	4 of 4	0.35	Down
Larval tubule	200 ± 10	4 of 4	1.00	None
Larval hindgut	81 ± 4	4 of 4	0.39	Down
Larval fat body	163 ± 59	4 of 4	0.80	None
Larval trachea	84 ± 9	4 of 4	0.41	Down
Larval carcass	65 ± 9	4 of 4	0.32	Down
S2 cells (growing)	150 ± 2	4 of 4	0.72	Down
Whole fly	207 ± 12	4 of 4

Microcephalin (MCPH1):

Annotation Number : CG8981
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260959
Gbrowse : chr2R:7784346-7791419 (-) // 100.0 //
Probeset : 1626590_a_at
Accessions : protein= NP_001163122; /// NP_001163123; /// NP_610711; /// NP_725088;, nucleotide= NM_001169651; /// NM_001169652; /// NM_136867; /// NM_165852;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay
FlyMine data for FBgn0260959.
Homophila reports that CG8981 is a close match (2e-11) to human gene MCPH1 (NP_078872), a gene associated with Microcephaly, autosomal recessive 1, 251200 (3);Premature chromosome condensation with microcephaly and mental retardation, 606858 (3).
BioGrid reports that CG8981 interacts with CG9572 .
TRiP has 1 RNAi stocks for FBgn0260959 available for purchase.
VDRC has 5 RNAi stocks for FBgn0260959 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 0	1 of 4	0.00	Down
Head	14 ± 0	3 of 4	0.10	Down
Eye	4 ± 2	1 of 4	0.04	Down
Thoracicoabdominal ganglion	6 ± 1	1 of 4	0.10	Down
Salivary gland	39 ± 3	4 of 4	0.33	Down
Crop	24 ± 2	4 of 4	0.20	Down
Midgut	32 ± 1	4 of 4	0.30	Down
Tubule	119 ± 19	4 of 4	1.00	None
Hindgut	20 ± 2	4 of 4	0.20	Down
Heart	12 ± 2	3 of 4	0.11	Down
Fat body	37 ± 5	4 of 4	0.31	Down
Ovary	203 ± 3	4 of 4	1.70	Up
Testis	202 ± 5	4 of 4	1.70	Up
Male accessory glands	25 ± 5	2 of 4	0.20	Down
Virgin spermatheca	12 ± 2	3 of 4	0.10	Down
Mated spermatheca	15 ± 3	2 of 4	0.13	Down
Adult carcass	40 ± 2	4 of 4	0.30	Down
Larval CNS	25 ± 3	4 of 4	0.22	Down
Larval Salivary gland	26 ± 4	2 of 4	0.23	Down
Larval midgut	29 ± 1	4 of 4	0.24	Down
Larval tubule	111 ± 6	4 of 4	0.90	None
Larval hindgut	29 ± 2	4 of 4	0.25	Down
Larval fat body	46 ± 12	4 of 4	0.40	Down
Larval trachea	16 ± 3	4 of 4	0.14	Down
Larval carcass	29 ± 4	4 of 4	0.24	Down
S2 cells (growing)	95 ± 7	4 of 4	0.80	None
Whole fly	118 ± 9	4 of 4

Looking for FBgn0260959. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720