FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0260960 through 18771 annotations produced 1 hits

baldspot (Baldspot):

Annotation Number : CG3971
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260960
Gbrowse : chr3L:16641919-16654727 (-) // 100.0 //
Probeset : 1637773_s_at
Accessions : protein= NP_648909; /// NP_730187;, nucleotide= NM_140652; /// NM_168678;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred f
FlyMine data for FBgn0260960.
BioGrid reports that CG3971 interacts with CG8264 CG7744 CG8457 .
TRiP has 1 RNAi stocks for FBgn0260960 available for purchase.
VDRC has 6 RNAi stocks for FBgn0260960 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	959 ± 50	4 of 4	2.00	Up
Head	582 ± 22	4 of 4	1.20	None
Eye	202 ± 19	4 of 4	0.42	Down
Thoracicoabdominal ganglion	1060 ± 33	4 of 4	2.20	Up
Salivary gland	688 ± 18	4 of 4	1.43	Up
Crop	4239 ± 205	4 of 4	8.80	Up
Midgut	809 ± 25	4 of 4	1.70	Up
Tubule	543 ± 42	4 of 4	1.10	None
Hindgut	3069 ± 87	4 of 4	6.40	Up
Heart	262 ± 33	4 of 4	0.54	Down
Fat body	401 ± 85	4 of 4	0.84	None
Ovary	273 ± 10	4 of 4	0.60	Down
Testis	287 ± 17	4 of 4	0.60	Down
Male accessory glands	64 ± 2	4 of 4	0.10	Down
Virgin spermatheca	753 ± 101	4 of 4	1.57	None
Mated spermatheca	291 ± 18	4 of 4	0.61	Down
Adult carcass	277 ± 20	4 of 4	0.60	Down
Larval CNS	606 ± 90	4 of 4	1.26	None
Larval Salivary gland	157 ± 19	4 of 4	0.33	Down
Larval midgut	441 ± 39	4 of 4	0.92	None
Larval tubule	205 ± 2	4 of 4	0.40	Down
Larval hindgut	610 ± 44	4 of 4	1.27	None
Larval fat body	141 ± 12	4 of 4	0.30	Down
Larval trachea	282 ± 18	4 of 4	0.59	Down
Larval carcass	938 ± 45	4 of 4	1.95	Up
S2 cells (growing)	395 ± 12	4 of 4	0.82	None
Whole fly	481 ± 35	4 of 4

Looking for FBgn0260960. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720