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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0261020 through 18771 annotations produced 1 hits



wollknaeuel (wol):

Annotation Number : CG7870
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261020
Gbrowse : chr2L:8301344-8302983 (-) // 100.0 //
Probeset : 1636123_at
Accessions : protein= NP_609202;, nucleotide= NM_135358;
Interpro : "0004581 // dolichyl-phosphate beta-glucosyltransferase activity // inferred from sequence or structural similarity ///
FlyMine data for FBgn0261020.
Homophila reports that CG7870 is a close match (2e-12) to human gene CDGIE;DPM1;MPDS (NP_003850), a gene associated with Congenital disorder of glycosylation, type Ie, 608799 (3).
TRiP has 1 RNAi stocks for FBgn0261020 available for purchase.
VDRC has 2 RNAi stocks for FBgn0261020 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain216 ± 34 of 4 0.90None
Head216 ± 54 of 4 0.90None
Eye188 ± 64 of 4 0.81None
Thoracicoabdominal ganglion197 ± 24 of 4 0.90None
Salivary gland2599 ± 944 of 411.23Up
Crop268 ± 104 of 4 1.20None
Midgut713 ± 174 of 4 3.10Up
Tubule803 ± 784 of 4 3.50Up
Hindgut334 ± 104 of 4 1.40Up
Heart242 ± 34 of 4 1.05None
Fat body236 ± 114 of 4 1.02None
Ovary249 ± 64 of 4 1.10None
Testis146 ± 44 of 4 0.60Down
Male accessory glands1033 ± 264 of 4 4.50Up
Virgin spermatheca446 ± 194 of 4 1.93Up
Mated spermatheca465 ± 384 of 4 2.01Up
Adult carcass199 ± 74 of 4 0.90None
Larval CNS255 ± 124 of 4 1.10None
Larval Salivary gland2812 ± 2154 of 412.15Up
Larval midgut609 ± 274 of 4 2.63Up
Larval tubule673 ± 254 of 4 2.90Up
Larval hindgut359 ± 104 of 4 1.55Up
Larval fat body307 ± 204 of 4 1.30Up
Larval trachea346 ± 464 of 4 1.50Up
Larval carcass307 ± 144 of 4 1.33Up
S2 cells (growing)738 ± 44 of 4 3.19Up
Whole fly231 ± 174 of 4

Looking for FBgn0261020. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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