FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261090 through 18771 annotations produced 2 hits

Synaptotagmin beta (Sytbeta):

Annotation Number : CG13462
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261090
Gbrowse : chr3L:15041819-15041999 (-) // 100.0 //
Probeset : 1631457_at
Accessions : protein= NP_648734; /// NP_652427;, nucleotide= NM_140477; /// NM_144170; /// NM_144170;
Pathway : 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // inferr
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid bin
FlyMine data for FBgn0261090.
TRiP has 2 RNAi stocks for FBgn0261090 available for purchase.
VDRC has 6 RNAi stocks for FBgn0261090 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 0	1 of 4	1.70	None
Head	6 ± 0	0 of 4	0.80	None
Eye	4 ± 0	0 of 4	0.53	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.50	None
Salivary gland	27 ± 3	0 of 4	3.24	Up
Crop	1 ± 0	0 of 4	0.20	None
Midgut	6 ± 2	0 of 4	0.80	None
Tubule	4 ± 1	0 of 4	0.50	Down
Hindgut	5 ± 1	0 of 4	0.60	None
Heart	12 ± 0	0 of 4	1.51	None
Fat body	19 ± 5	0 of 4	2.28	Up
Ovary	1 ± 0	0 of 4	0.20	None
Testis	2 ± 0	0 of 4	0.30	None
Male accessory glands	3 ± 0	0 of 4	0.40	None
Virgin spermatheca	4 ± 0	0 of 4	0.52	None
Mated spermatheca	4 ± 1	0 of 4	0.53	None
Adult carcass	10 ± 3	0 of 4	1.20	None
Larval CNS	4 ± 2	0 of 4	0.50	None
Larval Salivary gland	24 ± 4	0 of 4	2.85	Up
Larval midgut	6 ± 1	0 of 4	0.69	None
Larval tubule	2 ± 0	0 of 4	0.30	None
Larval hindgut	4 ± 1	0 of 4	0.53	None
Larval fat body	4 ± 2	0 of 4	0.50	None
Larval trachea	5 ± 3	0 of 4	0.58	None
Larval carcass	2 ± 0	0 of 4	0.33	None
S2 cells (growing)	1 ± 0	0 of 4	0.19	None
Whole fly	8 ± 2	0 of 4

Synaptotagmin beta (Sytbeta):

Annotation Number : CG3020
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261090
Gbrowse : chr3L:15009570-15027296 (-) // 100.0 //
Probeset : 1630846_at
Accessions : protein= NP_648734; /// NP_652427;, nucleotide= NM_140477; /// NM_144170; /// NM_144170;
Pathway : 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // inferr
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid bin
FlyMine data for FBgn0261090.
TRiP has 2 RNAi stocks for FBgn0261090 available for purchase.
VDRC has 6 RNAi stocks for FBgn0261090 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	31 ± 0	4 of 4	5.00	Up
Head	13 ± 2	3 of 4	2.20	Up
Eye	1 ± 0	0 of 4	0.24	Down
Thoracicoabdominal ganglion	18 ± 5	4 of 4	3.00	None
Salivary gland	4 ± 2	0 of 4	0.73	None
Crop	1 ± 0	0 of 4	0.30	Down
Midgut	9 ± 1	0 of 4	1.50	None
Tubule	5 ± 0	0 of 4	0.80	Down
Hindgut	7 ± 0	0 of 4	1.10	None
Heart	1 ± 0	0 of 4	0.25	Down
Fat body	8 ± 3	0 of 4	1.35	None
Ovary	1 ± 0	0 of 4	0.20	Down
Testis	11 ± 1	4 of 4	1.80	Up
Male accessory glands	9 ± 1	0 of 4	1.40	None
Virgin spermatheca	7 ± 0	2 of 4	1.18	None
Mated spermatheca	6 ± 2	1 of 4	1.04	None
Adult carcass	6 ± 2	0 of 4	1.00	None
Larval CNS	10 ± 1	4 of 4	1.71	Up
Larval Salivary gland	8 ± 1	1 of 4	1.29	None
Larval midgut	9 ± 1	0 of 4	1.53	None
Larval tubule	6 ± 0	0 of 4	1.00	None
Larval hindgut	5 ± 1	1 of 4	0.87	None
Larval fat body	6 ± 1	0 of 4	1.00	None
Larval trachea	4 ± 2	0 of 4	0.77	None
Larval carcass	7 ± 1	2 of 4	1.23	None
S2 cells (growing)	5 ± 1	0 of 4	0.93	None
Whole fly	6 ± 0	2 of 4

Looking for FBgn0261090. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720