FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261108 through 18771 annotations produced 1 hits

Autophagy-specific gene 13 (Atg13):

Annotation Number : CG7331
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261108
Gbrowse : chr3R:4175540-4178539 (+) // 100.0 //
Probeset : 1635910_at
Accessions : protein= NP_649796;, nucleotide= NM_141539;
Pathway : 0000407 // pre-autophagosomal structure // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0261108.
TRiP has 1 RNAi stocks for FBgn0261108 available for purchase.
VDRC has 3 RNAi stocks for FBgn0261108 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	128 ± 1	4 of 4	0.70	Down
Head	160 ± 4	4 of 4	0.90	None
Eye	137 ± 2	4 of 4	0.74	Down
Thoracicoabdominal ganglion	123 ± 2	4 of 4	0.70	Down
Salivary gland	803 ± 48	4 of 4	4.31	Up
Crop	350 ± 15	4 of 4	1.90	Up
Midgut	193 ± 9	4 of 4	1.00	None
Tubule	231 ± 12	4 of 4	1.20	Up
Hindgut	238 ± 13	4 of 4	1.30	Up
Heart	300 ± 11	4 of 4	1.61	Up
Fat body	408 ± 13	4 of 4	2.19	Up
Ovary	325 ± 5	4 of 4	1.70	Up
Testis	77 ± 2	4 of 4	0.40	Down
Male accessory glands	205 ± 8	4 of 4	1.10	None
Virgin spermatheca	605 ± 41	4 of 4	3.25	Up
Mated spermatheca	348 ± 30	4 of 4	1.87	Up
Adult carcass	322 ± 27	4 of 4	1.70	Up
Larval CNS	198 ± 18	4 of 4	1.06	None
Larval Salivary gland	168 ± 20	4 of 4	0.90	None
Larval midgut	177 ± 8	4 of 4	0.95	None
Larval tubule	265 ± 14	4 of 4	1.40	Up
Larval hindgut	251 ± 21	4 of 4	1.35	Up
Larval fat body	123 ± 10	4 of 4	0.70	Down
Larval trachea	182 ± 15	4 of 4	0.98	None
Larval carcass	243 ± 14	4 of 4	1.31	Up
S2 cells (growing)	194 ± 9	4 of 4	1.04	None
Whole fly	186 ± 9	4 of 4

Looking for FBgn0261108. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720