FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261244 through 18771 annotations produced 5 hits

inactivation no afterpotential E (inaE):

Annotation Number : CG33174
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261244
Gbrowse : chrX:13677781-13705534 (+) // 100.0 //
Probeset : 1625176_at
Accessions : protein= NP_001138195; /// NP_001138196; /// NP_788900; /// NP_788901;, nucleotide= NM_001144723; /// NM_001144724; /// NM_176727; /// NM_176728;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0004465 // lipoprotein lipase activity // inferred from direct assay /// 0004806 // triglyceride lipase activity // infe
FlyMine data for FBgn0261244.
BioGrid reports that CG33174 interacts with CG4306 CG7809 CG3978 .
VDRC has 5 RNAi stocks for FBgn0261244 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	716 ± 20	4 of 4	29.90	Up
Head	127 ± 11	4 of 4	5.30	Up
Eye	116 ± 8	4 of 4	4.87	Up
Thoracicoabdominal ganglion	673 ± 34	4 of 4	28.20	Up
Salivary gland	1 ± 0	0 of 4	0.05	Down
Crop	1 ± 0	0 of 4	0.00	Down
Midgut	0 ± 0	0 of 4	0.00	Down
Tubule	0 ± 0	0 of 4	0.00	Down
Hindgut	1 ± 1	0 of 4	0.10	Down
Heart	0 ± 0	0 of 4	0.03	Down
Fat body	0 ± 0	0 of 4	0.03	Down
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	6 ± 1	1 of 4	0.20	Down
Male accessory glands	6 ± 3	0 of 4	0.30	Down
Virgin spermatheca	0 ± 0	0 of 4	0.01	Down
Mated spermatheca	0 ± 0	0 of 4	0.02	Down
Adult carcass	6 ± 2	0 of 4	0.30	Down
Larval CNS	366 ± 30	4 of 4	15.34	Up
Larval Salivary gland	0 ± 0	0 of 4	0.03	Down
Larval midgut	1 ± 0	0 of 4	0.06	Down
Larval tubule	0 ± 0	0 of 4	0.00	Down
Larval hindgut	0 ± 0	0 of 4	0.01	Down
Larval fat body	3 ± 1	0 of 4	0.10	Down
Larval trachea	3 ± 4	0 of 4	0.13	Down
Larval carcass	2 ± 1	0 of 4	0.11	Down
S2 cells (growing)	0 ± 0	0 of 4	0.03	Down
Whole fly	23 ± 3	4 of 4

inactivation no afterpotential E (inaE):

Annotation Number : CT31049
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261244
Gbrowse : chrX:13703397-13705206 (+) // 100.0 //
Probeset : 1640287_s_at
Accessions : protein= NP_001138195; /// NP_001138196; /// NP_788900; /// NP_788901;, nucleotide= NM_001144723; /// NM_001144724; /// NM_176727; /// NM_176728;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0004465 // lipoprotein lipase activity // inferred from direct assay /// 0004806 // triglyceride lipase activity // infe
FlyMine data for FBgn0261244.
VDRC has 5 RNAi stocks for FBgn0261244 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	128 ± 11	4 of 4	22.10	Up
Head	18 ± 1	4 of 4	3.30	Up
Eye	16 ± 2	4 of 4	2.88	Up
Thoracicoabdominal ganglion	101 ± 5	4 of 4	17.50	Up
Salivary gland	8 ± 2	0 of 4	1.53	None
Crop	9 ± 1	0 of 4	1.70	None
Midgut	6 ± 1	0 of 4	1.10	None
Tubule	4 ± 1	0 of 4	0.80	None
Hindgut	7 ± 1	0 of 4	1.20	None
Heart	1 ± 0	0 of 4	0.29	None
Fat body	4 ± 4	1 of 4	0.73	None
Ovary	3 ± 0	0 of 4	0.50	None
Testis	4 ± 0	0 of 4	0.80	None
Male accessory glands	3 ± 1	0 of 4	0.60	None
Virgin spermatheca	4 ± 1	0 of 4	0.82	None
Mated spermatheca	4 ± 1	0 of 4	0.84	None
Adult carcass	9 ± 3	0 of 4	1.70	None
Larval CNS	49 ± 8	4 of 4	8.59	Up
Larval Salivary gland	8 ± 0	2 of 4	1.40	None
Larval midgut	4 ± 2	0 of 4	0.80	None
Larval tubule	6 ± 2	0 of 4	1.00	None
Larval hindgut	3 ± 0	0 of 4	0.67	None
Larval fat body	4 ± 1	0 of 4	0.80	None
Larval trachea	2 ± 1	0 of 4	0.37	None
Larval carcass	5 ± 1	0 of 4	0.95	None
S2 cells (growing)	3 ± 0	0 of 4	0.59	None
Whole fly	5 ± 2	1 of 4

inactivation no afterpotential E (inaE):

Annotation Number : CT31077
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261244
Gbrowse : chrX:13677684-13679904 (+) // 100.0 //
Probeset : 1632059_at
Accessions : protein= NP_001138195; /// NP_001138196; /// NP_788900; /// NP_788901;, nucleotide= NM_001144723; /// NM_001144724; /// NM_176727; /// NM_176728;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0004465 // lipoprotein lipase activity // inferred from direct assay /// 0004806 // triglyceride lipase activity // infe
FlyMine data for FBgn0261244.
VDRC has 5 RNAi stocks for FBgn0261244 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	11 ± 1	4 of 4	2.50	Up
Head	6 ± 1	2 of 4	1.40	None
Eye	6 ± 2	2 of 4	1.47	None
Thoracicoabdominal ganglion	7 ± 1	3 of 4	1.70	None
Salivary gland	5 ± 2	1 of 4	1.23	None
Crop	8 ± 1	2 of 4	1.90	Up
Midgut	7 ± 1	0 of 4	1.50	None
Tubule	4 ± 0	0 of 4	1.00	None
Hindgut	7 ± 1	3 of 4	1.50	None
Heart	3 ± 1	2 of 4	0.83	None
Fat body	7 ± 2	2 of 4	1.56	None
Ovary	3 ± 0	1 of 4	0.80	None
Testis	2 ± 1	0 of 4	0.60	None
Male accessory glands	9 ± 1	0 of 4	2.10	Up
Virgin spermatheca	4 ± 0	0 of 4	0.92	None
Mated spermatheca	5 ± 1	1 of 4	1.19	None
Adult carcass	5 ± 1	0 of 4	1.10	None
Larval CNS	5 ± 1	4 of 4	1.15	None
Larval Salivary gland	4 ± 1	1 of 4	1.05	None
Larval midgut	6 ± 1	1 of 4	1.42	None
Larval tubule	3 ± 1	1 of 4	0.70	None
Larval hindgut	3 ± 0	0 of 4	0.85	None
Larval fat body	6 ± 2	0 of 4	1.40	None
Larval trachea	5 ± 1	2 of 4	1.12	None
Larval carcass	3 ± 0	1 of 4	0.77	None
S2 cells (growing)	5 ± 0	3 of 4	1.16	None
Whole fly	4 ± 1	1 of 4

inactivation no afterpotential E (inaE):

Annotation Number : CG33174
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261244
Gbrowse : chrX:13677781-13699676 (+) // 100.0 //
Probeset : 1637006_at
Accessions : protein= NP_001138195; /// NP_001138196; /// NP_788900; /// NP_788901;, nucleotide= NM_001144723; /// NM_001144724; /// NM_176727; /// NM_176728;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0004465 // lipoprotein lipase activity // inferred from direct assay /// 0004806 // triglyceride lipase activity // infe
FlyMine data for FBgn0261244.
BioGrid reports that CG33174 interacts with CG4306 CG7809 CG3978 .
VDRC has 5 RNAi stocks for FBgn0261244 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	21 ± 1	4 of 4	1.30	None
Head	7 ± 1	1 of 4	0.50	None
Eye	18 ± 2	3 of 4	1.10	None
Thoracicoabdominal ganglion	11 ± 3	1 of 4	0.70	None
Salivary gland	15 ± 3	1 of 4	0.92	None
Crop	8 ± 1	0 of 4	0.50	None
Midgut	8 ± 2	0 of 4	0.50	None
Tubule	6 ± 1	0 of 4	0.40	Down
Hindgut	8 ± 1	1 of 4	0.50	None
Heart	21 ± 1	3 of 4	1.30	None
Fat body	17 ± 3	1 of 4	1.09	None
Ovary	37 ± 3	4 of 4	2.30	Up
Testis	5 ± 0	0 of 4	0.30	Down
Male accessory glands	12 ± 4	0 of 4	0.80	None
Virgin spermatheca	17 ± 1	1 of 4	1.08	None
Mated spermatheca	14 ± 2	2 of 4	0.89	None
Adult carcass	13 ± 1	0 of 4	0.80	None
Larval CNS	21 ± 2	4 of 4	1.29	None
Larval Salivary gland	19 ± 3	0 of 4	1.20	None
Larval midgut	20 ± 3	3 of 4	1.22	None
Larval tubule	8 ± 3	0 of 4	0.50	None
Larval hindgut	11 ± 1	2 of 4	0.71	None
Larval fat body	8 ± 3	1 of 4	0.50	None
Larval trachea	18 ± 3	4 of 4	1.14	None
Larval carcass	15 ± 2	2 of 4	0.91	None
S2 cells (growing)	9 ± 1	0 of 4	0.55	None
Whole fly	16 ± 3	2 of 4

inactivation no afterpotential E (inaE):

Annotation Number : CG33174
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261244
Gbrowse : chrX:13677781-13699676 (+) // 100.0 //
Probeset : 1627706_a_at
Accessions : protein= NP_001138195; /// NP_001138196; /// NP_788900; /// NP_788901;, nucleotide= NM_001144723; /// NM_001144724; /// NM_176727; /// NM_176728;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0004465 // lipoprotein lipase activity // inferred from direct assay /// 0004806 // triglyceride lipase activity // infe
FlyMine data for FBgn0261244.
BioGrid reports that CG33174 interacts with CG4306 CG7809 CG3978 .
VDRC has 5 RNAi stocks for FBgn0261244 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	54 ± 3	4 of 4	1.60	Up
Head	32 ± 5	4 of 4	0.90	None
Eye	10 ± 0	3 of 4	0.29	Down
Thoracicoabdominal ganglion	33 ± 6	4 of 4	1.00	None
Salivary gland	16 ± 5	0 of 4	0.47	Down
Crop	56 ± 4	4 of 4	1.70	Up
Midgut	16 ± 1	2 of 4	0.50	Down
Tubule	5 ± 1	0 of 4	0.20	Down
Hindgut	26 ± 1	4 of 4	0.80	None
Heart	8 ± 0	1 of 4	0.26	Down
Fat body	19 ± 6	2 of 4	0.57	None
Ovary	51 ± 3	4 of 4	1.50	Up
Testis	10 ± 1	1 of 4	0.30	Down
Male accessory glands	32 ± 2	4 of 4	1.00	None
Virgin spermatheca	8 ± 0	0 of 4	0.24	Down
Mated spermatheca	12 ± 4	0 of 4	0.37	Down
Adult carcass	34 ± 3	4 of 4	1.00	None
Larval CNS	16 ± 2	4 of 4	0.49	Down
Larval Salivary gland	9 ± 1	0 of 4	0.28	Down
Larval midgut	18 ± 2	2 of 4	0.53	Down
Larval tubule	7 ± 1	0 of 4	0.20	Down
Larval hindgut	14 ± 2	3 of 4	0.42	Down
Larval fat body	3 ± 1	0 of 4	0.10	Down
Larval trachea	3 ± 1	0 of 4	0.10	Down
Larval carcass	28 ± 1	4 of 4	0.82	None
S2 cells (growing)	81 ± 2	4 of 4	2.37	Up
Whole fly	34 ± 5	4 of 4

Looking for FBgn0261244. 5 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720