FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261245 through 18771 annotations produced 1 hits

singles bar (sing):

Annotation Number : CG13011
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261245
Gbrowse : chrX:16573347-16574095 (+) // 100.0 //
Probeset : 1627808_at
Accessions : protein= NP_573146;, nucleotide= NM_132918;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for FBgn0261245.
VDRC has 2 RNAi stocks for FBgn0261245 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 1	1 of 4	0.50	None
Head	6 ± 2	1 of 4	0.70	None
Eye	5 ± 1	1 of 4	0.58	None
Thoracicoabdominal ganglion	8 ± 0	2 of 4	0.90	None
Salivary gland	22 ± 3	2 of 4	2.37	Up
Crop	12 ± 2	1 of 4	1.30	None
Midgut	11 ± 1	0 of 4	1.20	None
Tubule	8 ± 0	1 of 4	0.90	None
Hindgut	11 ± 0	4 of 4	1.20	None
Heart	5 ± 2	2 of 4	0.63	None
Fat body	9 ± 5	3 of 4	0.95	None
Ovary	7 ± 0	3 of 4	0.80	None
Testis	7 ± 0	3 of 4	0.80	None
Male accessory glands	13 ± 1	1 of 4	1.40	None
Virgin spermatheca	7 ± 1	1 of 4	0.77	None
Mated spermatheca	6 ± 1	2 of 4	0.69	None
Adult carcass	7 ± 2	0 of 4	0.80	None
Larval CNS	5 ± 1	4 of 4	0.56	Down
Larval Salivary gland	10 ± 1	2 of 4	1.04	None
Larval midgut	9 ± 2	0 of 4	1.04	None
Larval tubule	10 ± 1	3 of 4	1.10	None
Larval hindgut	5 ± 1	2 of 4	0.61	None
Larval fat body	31 ± 3	4 of 4	3.30	Up
Larval trachea	3 ± 2	0 of 4	0.33	Down
Larval carcass	9 ± 0	2 of 4	0.95	None
S2 cells (growing)	7 ± 0	1 of 4	0.77	None
Whole fly	9 ± 1	4 of 4

Looking for FBgn0261245. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720