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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0261245 through 18771 annotations produced 1 hits



singles bar (sing):

Annotation Number : CG13011
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261245
Gbrowse : chrX:16573347-16574095 (+) // 100.0 //
Probeset : 1627808_at
Accessions : protein= NP_573146;, nucleotide= NM_132918;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for FBgn0261245.
VDRC has 2 RNAi stocks for FBgn0261245 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 11 of 4 0.50None
Head6 21 of 4 0.70None
Eye5 11 of 4 0.58None
Thoracicoabdominal ganglion8 02 of 4 0.90None
Salivary gland22 32 of 4 2.37Up
Crop12 21 of 4 1.30None
Midgut11 10 of 4 1.20None
Tubule8 01 of 4 0.90None
Hindgut11 04 of 4 1.20None
Heart5 22 of 4 0.63None
Fat body9 53 of 4 0.95None
Ovary7 03 of 4 0.80None
Testis7 03 of 4 0.80None
Male accessory glands13 11 of 4 1.40None
Virgin spermatheca7 11 of 4 0.77None
Mated spermatheca6 12 of 4 0.69None
Adult carcass7 20 of 4 0.80None
Larval CNS5 14 of 4 0.56Down
Larval Salivary gland10 12 of 4 1.04None
Larval midgut9 20 of 4 1.04None
Larval tubule10 13 of 4 1.10None
Larval hindgut5 12 of 4 0.61None
Larval fat body31 34 of 4 3.30Up
Larval trachea3 20 of 4 0.33Down
Larval carcass9 02 of 4 0.95None
S2 cells (growing)7 01 of 4 0.77None
Whole fly9 14 of 4

Looking for FBgn0261245. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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