FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261268 through 18771 annotations produced 2 hits

Cullin3 (Cul-3):

Annotation Number : CG31829
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261268
Gbrowse : chr2L:15269322-15270235 (-) // 100.0 //
Probeset : 1632211_at
Accessions : protein= NP_523573; /// NP_723907; /// NP_723908; /// NP_723909;, nucleotide= NM_078849; /// NM_165110; /// NM_165111; /// NM_165112; /// NM_165112;
Pathway : 0000152 // nuclear ubiquitin ligase complex // inferred from sequence or structural similarity /// 0019005 // SCF ubiqui
Interpro : 0004842 // ubiquitin-protein ligase activity // non-traceable author statement /// 0004842 // ubiquitin-protein ligase a
FlyMine data for FBgn0261268.
TRiP has 2 RNAi stocks for FBgn0261268 available for purchase.
VDRC has 3 RNAi stocks for FBgn0261268 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.10	Down
Head	2 ± 1	0 of 4	0.20	Down
Eye	0 ± 0	0 of 4	0.04	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.10	Down
Salivary gland	1 ± 0	0 of 4	0.13	Down
Crop	0 ± 0	0 of 4	0.00	Down
Midgut	1 ± 0	0 of 4	0.10	Down
Tubule	1 ± 0	0 of 4	0.10	Down
Hindgut	1 ± 0	0 of 4	0.10	Down
Heart	0 ± 0	0 of 4	0.04	Down
Fat body	1 ± 0	0 of 4	0.14	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	89 ± 10	4 of 4	6.80	Up
Male accessory glands	1 ± 0	0 of 4	0.10	Down
Virgin spermatheca	0 ± 0	0 of 4	0.06	Down
Mated spermatheca	0 ± 0	0 of 4	0.07	Down
Adult carcass	2 ± 0	0 of 4	0.20	Down
Larval CNS	0 ± 0	0 of 4	0.06	Down
Larval Salivary gland	1 ± 0	0 of 4	0.09	Down
Larval midgut	4 ± 2	0 of 4	0.34	Down
Larval tubule	0 ± 0	0 of 4	0.10	Down
Larval hindgut	0 ± 0	0 of 4	0.03	Down
Larval fat body	9 ± 7	0 of 4	0.70	None
Larval trachea	1 ± 1	0 of 4	0.12	Down
Larval carcass	0 ± 0	0 of 4	0.04	Down
S2 cells (growing)	0 ± 0	0 of 4	0.06	Down
Whole fly	13 ± 1	3 of 4

Cullin3 (Cul-3):

Annotation Number : CG11861
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261268
Gbrowse : chr2L:15266026-15272011 (-) // 100.0 //
Probeset : 1624970_s_at
Accessions : protein= NP_523573; /// NP_723907; /// NP_723908; /// NP_723909;, nucleotide= NM_078849; /// NM_165110; /// NM_165111; /// NM_165112; /// NM_165112;
Pathway : 0000152 // nuclear ubiquitin ligase complex // inferred from sequence or structural similarity /// 0019005 // SCF ubiqui
Interpro : 0004842 // ubiquitin-protein ligase activity // non-traceable author statement /// 0004842 // ubiquitin-protein ligase a
FlyMine data for FBgn0261268.
Homophila reports that CG11861 is a close match (1e-127) to human gene CUL4B;MRXHF2;MRXSC;SFM2 (NP_003579), a gene associated with Mental retardation syndrome, X-linked, Cabezas type, 300354 (3);Mental retardation-hypotonic facies syndrome, X-linked, 2, 300639 (3).
BioGrid reports that CG11861 interacts with CG3629 CG7948 CG5731 CG2189 CG1120 CG12432 CG33553 CG4878 CG3193 CG7602 CG6369 .
TRiP has 2 RNAi stocks for FBgn0261268 available for purchase.
VDRC has 3 RNAi stocks for FBgn0261268 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	182 ± 2	4 of 4	0.50	Down
Head	141 ± 10	4 of 4	0.40	Down
Eye	98 ± 2	4 of 4	0.25	Down
Thoracicoabdominal ganglion	158 ± 11	4 of 4	0.40	Down
Salivary gland	185 ± 2	4 of 4	0.48	Down
Crop	224 ± 12	4 of 4	0.60	Down
Midgut	141 ± 5	4 of 4	0.40	Down
Tubule	143 ± 7	4 of 4	0.40	Down
Hindgut	145 ± 3	4 of 4	0.40	Down
Heart	89 ± 2	4 of 4	0.23	Down
Fat body	125 ± 5	4 of 4	0.32	Down
Ovary	365 ± 7	4 of 4	0.90	None
Testis	1653 ± 43	4 of 4	4.20	Up
Male accessory glands	170 ± 5	4 of 4	0.40	Down
Virgin spermatheca	83 ± 4	4 of 4	0.21	Down
Mated spermatheca	80 ± 4	4 of 4	0.21	Down
Adult carcass	132 ± 7	4 of 4	0.30	Down
Larval CNS	217 ± 8	4 of 4	0.56	Down
Larval Salivary gland	229 ± 17	4 of 4	0.59	Down
Larval midgut	115 ± 12	4 of 4	0.30	Down
Larval tubule	253 ± 3	4 of 4	0.60	Down
Larval hindgut	177 ± 5	4 of 4	0.45	Down
Larval fat body	383 ± 82	4 of 4	1.00	None
Larval trachea	100 ± 6	4 of 4	0.26	Down
Larval carcass	185 ± 17	4 of 4	0.48	Down
S2 cells (growing)	312 ± 6	4 of 4	0.80	Down
Whole fly	390 ± 21	4 of 4

Looking for FBgn0261268. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720