Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0261270 through 18771 annotations produced 1 hits



chr2R:10156276-10158159 (-) // 100.0 // ("Selenide):

Annotation Number : CG8553
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1628834_a_at
Accessions : protein= EC:2.7.9.3, nucleotide=
Interpro : 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // infe
BioGrid reports that CG8553 interacts with CG2845 CG18085 CG10079 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain114 ± 84 of 4 0.20Down
Head123 ± 14 of 4 0.30Down
Eye52 ± 44 of 4 0.11Down
Thoracicoabdominal ganglion139 ± 44 of 4 0.30Down
Salivary gland216 ± 474 of 4 0.45Down
Crop151 ± 84 of 4 0.30Down
Midgut175 ± 104 of 4 0.40Down
Tubule215 ± 184 of 4 0.40Down
Hindgut149 ± 114 of 4 0.30Down
Heart108 ± 84 of 4 0.22Down
Fat body166 ± 374 of 4 0.34Down
Ovary839 ± 164 of 4 1.70Up
Testis161 ± 74 of 4 0.30Down
Male accessory glands113 ± 134 of 4 0.20Down
Virgin spermatheca209 ± 144 of 4 0.43Down
Mated spermatheca162 ± 144 of 4 0.34Down
Adult carcass129 ± 84 of 4 0.30Down
Larval CNS633 ± 714 of 4 1.31Up
Larval Salivary gland522 ± 534 of 4 1.08None
Larval midgut154 ± 124 of 4 0.32Down
Larval tubule183 ± 34 of 4 0.40Down
Larval hindgut181 ± 44 of 4 0.38Down
Larval fat body179 ± 54 of 4 0.40Down
Larval trachea454 ± 724 of 4 0.94None
Larval carcass325 ± 144 of 4 0.67Down
S2 cells (growing)496 ± 214 of 4 1.03None
Whole fly483 ± 234 of 4

Looking for FBgn0261270. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime