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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0261276 through 18771 annotations produced 1 hits



March 2006 (FlyBase/BDGP 5.3) (chr2R:10118124-10122953 (-) // 100.0 //):

Annotation Number : CG8479
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse :
Probeset : 1626840_a_at
Accessions : protein= , nucleotide=
Interpro : 0008053 // mitochondrial fusion // inferred from mutant phenotype /// 0035073 // pupariation // inferred from mutant phe
Homophila reports that CG8479 is a close match (3e-23) to human gene DNM1L;DRP1;DVLP;DYMPLE (NP_005681), a gene associated with Encephalopahty, lethal, due to defective mitochondrial peroxisomal fission (3).
BioGrid reports that CG8479 interacts with CG9636 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain636 114 of 4 2.00Up
Head412 144 of 4 1.30Up
Eye530 224 of 4 1.68Up
Thoracicoabdominal ganglion758 154 of 4 2.40Up
Salivary gland282 114 of 4 0.90None
Crop445 54 of 4 1.40Up
Midgut277 44 of 4 0.90Down
Tubule439 154 of 4 1.40Up
Hindgut506 24 of 4 1.60Up
Heart409 134 of 4 1.30Up
Fat body564 274 of 4 1.79Up
Ovary428 54 of 4 1.40Up
Testis137 64 of 4 0.40Down
Male accessory glands283 74 of 4 0.90Down
Virgin spermatheca600 184 of 4 1.90Up
Mated spermatheca540 274 of 4 1.71Up
Adult carcass451 174 of 4 1.40Up
Larval CNS448 104 of 4 1.42Up
Larval Salivary gland292 84 of 4 0.93None
Larval midgut311 104 of 4 0.99None
Larval tubule327 84 of 4 1.00None
Larval hindgut804 374 of 4 2.55Up
Larval fat body576 504 of 4 1.80Up
Larval trachea391 204 of 4 1.24Up
Larval carcass428 224 of 4 1.36Up
S2 cells (growing)607 164 of 4 1.92Up
Whole fly315 44 of 4

Looking for FBgn0261276. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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