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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0261284 through 18771 annotations produced 1 hits



boudin (bou):

Annotation Number : CG14430
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261284
Gbrowse : chrX:6880522-6881236 (+) // 100.0 //
Probeset : 1627319_at
Accessions : protein= NP_572373;, nucleotide= NM_132145;
Pathway : open tracheal system // inferred from mutant phenotype"
Interpro : 0005576 // extracellular region // inferred from direct assay /// 0046658 // anchored to plasma membrane // inferred fro
FlyMine data for FBgn0261284.
VDRC has 2 RNAi stocks for FBgn0261284 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain22 ± 14 of 4 0.30Down
Head138 ± 84 of 4 2.00Up
Eye151 ± 74 of 4 2.16Up
Thoracicoabdominal ganglion24 ± 14 of 4 0.30Down
Salivary gland88 ± 102 of 4 1.27None
Crop253 ± 24 of 4 3.60Up
Midgut13 ± 20 of 4 0.20Down
Tubule13 ± 20 of 4 0.20Down
Hindgut328 ± 94 of 4 4.70Up
Heart79 ± 84 of 4 1.14None
Fat body139 ± 84 of 4 1.99Up
Ovary47 ± 24 of 4 0.70Down
Testis13 ± 24 of 4 0.20Down
Male accessory glands522 ± 174 of 4 7.50Up
Virgin spermatheca158 ± 74 of 4 2.27Up
Mated spermatheca170 ± 44 of 4 2.43Up
Adult carcass109 ± 74 of 4 1.60Up
Larval CNS201 ± 284 of 4 2.88Up
Larval Salivary gland553 ± 214 of 4 7.90Up
Larval midgut28 ± 10 of 4 0.41Down
Larval tubule9 ± 10 of 4 0.10Down
Larval hindgut311 ± 84 of 4 4.44Up
Larval fat body112 ± 54 of 4 1.60Up
Larval trachea925 ± 754 of 413.20Up
Larval carcass172 ± 114 of 4 2.46Up
S2 cells (growing)7 ± 11 of 4 0.11Down
Whole fly70 ± 74 of 4

Looking for FBgn0261284. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime