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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0261290 through 18771 annotations produced 1 hits



Chemosensory protein A 84a (CheA84a):

Annotation Number : S.C3R000532
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261290
Gbrowse : chr3R:4029947-4030337 (-) // 100.0 //
Probeset : 1637374_at
Accessions : protein= NP_001027150;, nucleotide= NM_001031979;
FlyMine data for FBgn0261290.
VDRC has 1 RNAi stocks for FBgn0261290 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.10Down
Head3 ± 00 of 4 0.20Down
Eye1 ± 00 of 4 0.05Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.10Down
Salivary gland7 ± 20 of 4 0.34Down
Crop2 ± 10 of 4 0.10Down
Midgut3 ± 20 of 4 0.20Down
Tubule2 ± 00 of 4 0.10Down
Hindgut1 ± 00 of 4 0.10Down
Heart0 ± 00 of 4 0.03Down
Fat body4 ± 30 of 4 0.21Down
Ovary0 ± 00 of 4 0.00Down
Testis3 ± 00 of 4 0.20Down
Male accessory glands2 ± 10 of 4 0.10Down
Virgin spermatheca1 ± 00 of 4 0.07Down
Mated spermatheca3 ± 10 of 4 0.14Down
Adult carcass156 ± 64 of 4 7.50Up
Larval CNS3 ± 21 of 4 0.19Down
Larval Salivary gland1 ± 00 of 4 0.05Down
Larval midgut3 ± 10 of 4 0.16Down
Larval tubule1 ± 00 of 4 0.10Down
Larval hindgut1 ± 00 of 4 0.05Down
Larval fat body2 ± 00 of 4 0.10Down
Larval trachea0 ± 00 of 4 0.03Down
Larval carcass2 ± 00 of 4 0.11Down
S2 cells (growing)1 ± 00 of 4 0.08Down
Whole fly20 ± 14 of 4

Looking for FBgn0261290. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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