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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0261293 through 18771 annotations produced 1 hits



Chemosensory protein B 53b (CheB53b):

Annotation Number : CG33457
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261293
Gbrowse : chr2R:12354213-12356439 (+) // 100.0 //
Probeset : 1629299_at
Accessions : protein= NP_001014531;, nucleotide= NM_001014531;
Pathway : 0005615 // extracellular space // inferred from sequence or structural similarity
Interpro : 0008289 // lipid binding // not recorded
FlyMine data for FBgn0261293.
VDRC has 1 RNAi stocks for FBgn0261293 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.20None
Head1 ± 00 of 4 0.50None
Eye2 ± 10 of 4 0.84None
Thoracicoabdominal ganglion2 ± 00 of 4 0.70None
Salivary gland3 ± 10 of 4 1.19None
Crop5 ± 10 of 4 1.80None
Midgut2 ± 10 of 4 0.90None
Tubule2 ± 00 of 4 0.90None
Hindgut3 ± 10 of 4 1.10None
Heart0 ± 00 of 4 0.18Down
Fat body5 ± 11 of 4 1.73None
Ovary1 ± 00 of 4 0.40None
Testis1 ± 00 of 4 0.50None
Male accessory glands2 ± 10 of 4 0.70None
Virgin spermatheca1 ± 00 of 4 0.58None
Mated spermatheca3 ± 10 of 4 0.99None
Adult carcass11 ± 12 of 4 3.60Up
Larval CNS1 ± 10 of 4 0.52None
Larval Salivary gland1 ± 00 of 4 0.48None
Larval midgut0 ± 00 of 4 0.28Down
Larval tubule1 ± 10 of 4 0.60None
Larval hindgut0 ± 00 of 4 0.29Down
Larval fat body4 ± 10 of 4 1.60None
Larval trachea0 ± 00 of 4 0.30Down
Larval carcass3 ± 10 of 4 1.02None
S2 cells (growing)1 ± 00 of 4 0.56None
Whole fly3 ± 00 of 4

Looking for FBgn0261293. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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