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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0261358 through 18771 annotations produced 1 hits



/// (CG42634 /// CG42635):

Annotation Number : CG15149
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261357 /// FBgn0261358
Gbrowse : chr2L:18007993-18008826 (+) // 100.0 //
Probeset : 1634118_at
Accessions : protein= NP_001163002; /// NP_609859;, nucleotide= NM_001169531; /// NM_136015;
FlyMine data for FBgn0261357 /// FBgn0261358.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 11 of 4 0.20Down
Head4 ± 11 of 4 0.20Down
Eye4 ± 00 of 4 0.20Down
Thoracicoabdominal ganglion6 ± 12 of 4 0.30Down
Salivary gland15 ± 42 of 4 0.66None
Crop6 ± 11 of 4 0.30Down
Midgut6 ± 10 of 4 0.30Down
Tubule8 ± 01 of 4 0.30Down
Hindgut5 ± 11 of 4 0.30Down
Heart5 ± 00 of 4 0.22Down
Fat body9 ± 33 of 4 0.39Down
Ovary2 ± 00 of 4 0.10Down
Testis300 ± 84 of 413.10Up
Male accessory glands7 ± 00 of 4 0.30Down
Virgin spermatheca7 ± 21 of 4 0.30Down
Mated spermatheca6 ± 03 of 4 0.29Down
Adult carcass6 ± 00 of 4 0.30Down
Larval CNS4 ± 21 of 4 0.21Down
Larval Salivary gland5 ± 10 of 4 0.23Down
Larval midgut7 ± 21 of 4 0.31Down
Larval tubule6 ± 01 of 4 0.30Down
Larval hindgut4 ± 11 of 4 0.17Down
Larval fat body14 ± 42 of 4 0.60None
Larval trachea5 ± 11 of 4 0.26Down
Larval carcass5 ± 11 of 4 0.26Down
S2 cells (growing)4 ± 01 of 4 0.17Down
Whole fly23 ± 34 of 4

Looking for FBgn0261358. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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