FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261360 through 18771 annotations produced 3 hits

(CG42637):

Annotation Number : CG32215
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261359 /// FBgn0261360
Gbrowse : chr3L:19773131-19786663 (-) // 100.0 //
Probeset : 1630560_s_at
Accessions : protein= NP_001007096; /// NP_001007097; /// NP_001163473; /// NP_001163474; /// NP_001163475; /// NP_524165;, nucleotide= NM_001007095; /// NM_001007096; /// NM_001170002; /// NM_001170003; /// NM_001170004; /// NM_079441;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004383 // guanylate cyclase activity // inferr
FlyMine data for FBgn0261359 /// FBgn0261360.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.30	None
Head	7 ± 2	0 of 4	0.90	None
Eye	1 ± 1	0 of 4	0.22	None
Thoracicoabdominal ganglion	2 ± 0	0 of 4	0.30	None
Salivary gland	12 ± 2	0 of 4	1.56	None
Crop	8 ± 1	2 of 4	1.10	None
Midgut	11 ± 4	0 of 4	1.40	None
Tubule	5 ± 0	0 of 4	0.60	Down
Hindgut	12 ± 1	1 of 4	1.50	None
Heart	1 ± 0	0 of 4	0.14	None
Fat body	7 ± 2	0 of 4	0.91	None
Ovary	14 ± 1	4 of 4	1.80	None
Testis	0 ± 0	0 of 4	0.10	None
Male accessory glands	7 ± 0	0 of 4	0.90	None
Virgin spermatheca	3 ± 0	0 of 4	0.39	None
Mated spermatheca	3 ± 0	0 of 4	0.39	None
Adult carcass	7 ± 2	0 of 4	0.90	None
Larval CNS	2 ± 2	0 of 4	0.27	None
Larval Salivary gland	2 ± 1	0 of 4	0.34	None
Larval midgut	4 ± 1	0 of 4	0.58	None
Larval tubule	9 ± 2	2 of 4	1.10	None
Larval hindgut	7 ± 1	0 of 4	0.95	None
Larval fat body	8 ± 0	0 of 4	1.00	None
Larval trachea	3 ± 1	0 of 4	0.46	None
Larval carcass	9 ± 1	1 of 4	1.13	None
S2 cells (growing)	19 ± 2	4 of 4	2.39	Up
Whole fly	8 ± 2	2 of 4

(CG42637):

Annotation Number : CG32215
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261359 /// FBgn0261360
Gbrowse : chr3L:19773131-19786663 (-) // 100.0 //
Probeset : 1626977_at
Accessions : protein= NP_001007096; /// NP_001007097; /// NP_524165;, nucleotide= NM_001007095; /// NM_001007096; /// NM_079441;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004383 // guanylate cyclase activity // inferr
FlyMine data for FBgn0261359 /// FBgn0261360.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.50	Down
Head	0 ± 0	0 of 4	0.20	Down
Eye	1 ± 0	0 of 4	0.47	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.30	Down
Salivary gland	10 ± 3	1 of 4	2.55	None
Crop	1 ± 0	0 of 4	0.30	Down
Midgut	2 ± 0	1 of 4	0.70	None
Tubule	3 ± 0	0 of 4	0.80	None
Hindgut	3 ± 0	2 of 4	0.90	None
Heart	3 ± 1	1 of 4	0.81	None
Fat body	3 ± 1	0 of 4	0.75	None
Ovary	3 ± 0	0 of 4	0.80	None
Testis	1 ± 0	0 of 4	0.30	Down
Male accessory glands	2 ± 1	0 of 4	0.70	None
Virgin spermatheca	0 ± 0	0 of 4	0.12	Down
Mated spermatheca	0 ± 0	0 of 4	0.13	Down
Adult carcass	1 ± 0	0 of 4	0.40	None
Larval CNS	2 ± 1	1 of 4	0.54	None
Larval Salivary gland	2 ± 0	0 of 4	0.67	None
Larval midgut	1 ± 0	0 of 4	0.46	None
Larval tubule	1 ± 0	0 of 4	0.40	None
Larval hindgut	1 ± 0	0 of 4	0.42	Down
Larval fat body	1 ± 1	0 of 4	0.40	None
Larval trachea	1 ± 1	0 of 4	0.34	Down
Larval carcass	1 ± 0	0 of 4	0.39	None
S2 cells (growing)	0 ± 0	0 of 4	0.23	Down
Whole fly	4 ± 0	0 of 4

(CG42637):

Annotation Number : CG8742
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261359 /// FBgn0261360
Gbrowse : chr3L:19712625-19719984 (-) // 100.0 // /// chr3L:19744041-19751399 (-) // 100.0 //
Probeset : 1626925_at
Accessions : protein= NP_001007096; /// NP_001007097; /// NP_001163473; /// NP_001163474; /// NP_001163475; /// NP_524165;, nucleotide= NM_001007095; /// NM_001007096; /// NM_001170002; /// NM_001170003; /// NM_001170004; /// NM_079441;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004383 // guanylate cyclase activity // inferr
FlyMine data for FBgn0261359 /// FBgn0261360.
Homophila reports that CG8742 is a close match (8e-11) to human gene LRRK2;PARK8 (NP_940980), a gene associated with Parkinson disease-8, 607060 (3).

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	112 ± 6	4 of 4	0.50	Down
Head	136 ± 12	4 of 4	0.50	Down
Eye	137 ± 8	4 of 4	0.55	Down
Thoracicoabdominal ganglion	139 ± 9	4 of 4	0.60	Down
Salivary gland	615 ± 26	4 of 4	2.47	Up
Crop	515 ± 12	4 of 4	2.10	Up
Midgut	349 ± 10	4 of 4	1.40	Up
Tubule	584 ± 24	4 of 4	2.30	Up
Hindgut	630 ± 23	4 of 4	2.50	Up
Heart	137 ± 11	4 of 4	0.55	Down
Fat body	102 ± 17	4 of 4	0.41	Down
Ovary	596 ± 8	4 of 4	2.40	Up
Testis	44 ± 3	4 of 4	0.20	Down
Male accessory glands	203 ± 8	4 of 4	0.80	None
Virgin spermatheca	76 ± 2	4 of 4	0.31	Down
Mated spermatheca	81 ± 12	4 of 4	0.33	Down
Adult carcass	155 ± 10	4 of 4	0.60	Down
Larval CNS	138 ± 17	4 of 4	0.56	Down
Larval Salivary gland	319 ± 10	4 of 4	1.28	None
Larval midgut	472 ± 25	4 of 4	1.90	Up
Larval tubule	495 ± 9	4 of 4	2.00	Up
Larval hindgut	875 ± 29	4 of 4	3.51	Up
Larval fat body	350 ± 36	4 of 4	1.40	None
Larval trachea	177 ± 19	4 of 4	0.71	None
Larval carcass	337 ± 45	4 of 4	1.36	None
S2 cells (growing)	264 ± 2	4 of 4	1.06	None
Whole fly	249 ± 29	4 of 4

Looking for FBgn0261360. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720