FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261385 through 18771 annotations produced 1 hits

scraps (scra):

Annotation Number : CG2092
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261385
Gbrowse : chr2R:3477623-3482759 (+) // 100.0 //
Probeset : 1637214_a_at
Accessions : protein= NP_001014502; /// NP_724582; /// NP_724583;, nucleotide= NM_001014502; /// NM_165543; /// NM_165544;
Pathway : actomyosin contractile ring assembly // inferred from mutant phenotype /// 0007009 // plasma membrane organization // i
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 00057
FlyMine data for FBgn0261385.
BioGrid reports that CG2092 interacts with CG4454 CG7590 .
TRiP has 1 RNAi stocks for FBgn0261385 available for purchase.
VDRC has 3 RNAi stocks for FBgn0261385 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	0.00	Down
Head	9 ± 1	3 of 4	0.10	Down
Eye	8 ± 2	3 of 4	0.06	Down
Thoracicoabdominal ganglion	6 ± 1	2 of 4	0.00	Down
Salivary gland	25 ± 2	2 of 4	0.17	Down
Crop	7 ± 0	0 of 4	0.00	Down
Midgut	18 ± 1	4 of 4	0.10	Down
Tubule	6 ± 2	0 of 4	0.00	Down
Hindgut	9 ± 0	0 of 4	0.10	Down
Heart	3 ± 1	0 of 4	0.02	Down
Fat body	9 ± 2	2 of 4	0.06	Down
Ovary	374 ± 4	4 of 4	2.60	Up
Testis	76 ± 0	4 of 4	0.50	Down
Male accessory glands	7 ± 1	1 of 4	0.10	Down
Virgin spermatheca	10 ± 1	3 of 4	0.07	Down
Mated spermatheca	7 ± 1	1 of 4	0.05	Down
Adult carcass	13 ± 3	3 of 4	0.10	Down
Larval CNS	405 ± 33	4 of 4	2.77	Up
Larval Salivary gland	122 ± 4	4 of 4	0.84	None
Larval midgut	24 ± 4	4 of 4	0.17	Down
Larval tubule	17 ± 1	4 of 4	0.10	Down
Larval hindgut	29 ± 1	4 of 4	0.20	Down
Larval fat body	35 ± 2	4 of 4	0.20	Down
Larval trachea	85 ± 14	4 of 4	0.58	Down
Larval carcass	54 ± 3	4 of 4	0.37	Down
S2 cells (growing)	582 ± 29	4 of 4	3.98	Up
Whole fly	146 ± 19	4 of 4

Looking for FBgn0261385. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720