FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261396 through 18771 annotations produced 1 hits

Regulatory particle non-ATPase 3 (Rpn3):

Annotation Number : CG10484
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0261396
Gbrowse : chr2L:19051829-19053681 (+) // 100.0 //
Probeset : 1628269_at
Accessions : protein= NP_477300;, nucleotide= NM_057952;
Pathway : "0000502 // proteasome complex // inferred from sequence or structural similarity /// 0000502 // proteasome complex // i
Interpro : lid subcomplex // inferred from sequence or structural similarity"
FlyMine data for FBgn0261396.
BioGrid reports that CG10484 interacts with CG14145 CG32491 .
TRiP has 2 RNAi stocks for FBgn0261396 available for purchase.
VDRC has 2 RNAi stocks for FBgn0261396 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	266 ± 7	4 of 4	0.50	Down
Head	322 ± 6	4 of 4	0.60	Down
Eye	291 ± 6	4 of 4	0.52	Down
Thoracicoabdominal ganglion	253 ± 5	4 of 4	0.50	Down
Salivary gland	341 ± 19	4 of 4	0.61	Down
Crop	493 ± 5	4 of 4	0.90	None
Midgut	412 ± 11	4 of 4	0.70	Down
Tubule	612 ± 49	4 of 4	1.10	None
Hindgut	396 ± 4	4 of 4	0.70	Down
Heart	900 ± 39	4 of 4	1.62	Up
Fat body	822 ± 67	4 of 4	1.48	Up
Ovary	802 ± 6	4 of 4	1.40	Up
Testis	327 ± 6	4 of 4	0.60	Down
Male accessory glands	433 ± 19	4 of 4	0.80	Down
Virgin spermatheca	479 ± 25	4 of 4	0.86	None
Mated spermatheca	460 ± 35	4 of 4	0.83	None
Adult carcass	642 ± 19	4 of 4	1.20	Up
Larval CNS	596 ± 29	4 of 4	1.07	None
Larval Salivary gland	862 ± 66	4 of 4	1.55	Up
Larval midgut	782 ± 71	4 of 4	1.41	Up
Larval tubule	1656 ± 28	4 of 4	3.00	Up
Larval hindgut	781 ± 56	4 of 4	1.40	Up
Larval fat body	676 ± 54	4 of 4	1.20	None
Larval trachea	548 ± 83	4 of 4	0.99	None
Larval carcass	1317 ± 154	4 of 4	2.37	Up
S2 cells (growing)	553 ± 7	4 of 4	1.00	None
Whole fly	556 ± 21	4 of 4

Looking for FBgn0261396. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720