FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0261434 through 18771 annotations produced 1 hits

chr3R:170727-172372 (-) // 100.0 // ():

Annotation Number : CG9768
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1638586_at
Accessions : protein= , nucleotide= NP_524221;
Pathway : "0001706 // endoderm formation // traceable author statement /// 0001708 // cell fate specification // traceable author
Interpro : DNA-dependent // non-traceable author statement /// 0007362 // terminal region determination // traceable author statem
FlyMine data for full length.
Homophila reports that CG9768 is a close match (1e-11) to human gene GLIS3;ZNF515 (NP_689842), a gene associated with Diabetes mellitus, neonatal, with congenital hypothyroidism, 610199 (3).
BioGrid reports that CG9768 interacts with CG7383 CG6964 CG17046 CG1389 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 1	0 of 4	1.10	None
Head	2 ± 1	0 of 4	0.50	Down
Eye	3 ± 0	0 of 4	0.61	None
Thoracicoabdominal ganglion	61 ± 2	4 of 4	10.60	Up
Salivary gland	12 ± 3	0 of 4	2.16	None
Crop	3 ± 1	0 of 4	0.70	None
Midgut	0 ± 0	0 of 4	0.20	Down
Tubule	1 ± 0	0 of 4	0.30	Down
Hindgut	1 ± 1	0 of 4	0.30	Down
Heart	2 ± 0	0 of 4	0.39	Down
Fat body	5 ± 3	0 of 4	0.98	None
Ovary	1 ± 0	0 of 4	0.20	Down
Testis	9 ± 0	1 of 4	1.60	Up
Male accessory glands	6 ± 1	0 of 4	1.20	None
Virgin spermatheca	7 ± 1	0 of 4	1.25	None
Mated spermatheca	6 ± 0	0 of 4	1.07	None
Adult carcass	5 ± 2	0 of 4	1.00	None
Larval CNS	114 ± 14	4 of 4	19.89	Up
Larval Salivary gland	6 ± 1	0 of 4	1.07	None
Larval midgut	1 ± 0	0 of 4	0.30	Down
Larval tubule	4 ± 0	0 of 4	0.80	None
Larval hindgut	2 ± 1	0 of 4	0.35	None
Larval fat body	6 ± 2	0 of 4	1.10	None
Larval trachea	3 ± 1	0 of 4	0.60	Down
Larval carcass	3 ± 1	0 of 4	0.55	None
S2 cells (growing)	2 ± 0	0 of 4	0.38	Down
Whole fly	5 ± 0	0 of 4

Looking for FBgn0261434. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720